Uncultured Sphingopyxis sp. UC10: SPPYR_2858
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Entry
SPPYR_2858 CDS
T05531
Symbol
radA
Name
(GenBank) DNA repair protein RadA homolog
KO
K04485
DNA repair protein RadA/Sms
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_2858 (radA)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPPYR_2858 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_30
AAA_16
AAA_22
AAA_5
AAA_24
Lon_C
SLFN-g3_helicase
CobU
AAA
NTPase_1
nSTAND3
RecA
ATPase_2
AAA_14
Glyco_hydro2_C5
ABC_tran
CbiA
AAA_29
zf-RING_10
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
SBV33978
UniProt:
A0A1Y5PVF3
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All DBs
Position
SPPYR:complement(2990429..2991790)
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AA seq
453 aa
AA seq
DB search
MAKAKRQYVCQNCGGVSYRWQGQCADCGEWNTLVEEAAETVFSAKHDLSRGGRTIALETL
DADSRMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRLAKSGKSVV
YISGEEAAAQVRLRAQRLGLGQAPVALASATSVRDILATLDGRDADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRYAKDSDAAIVLVGHVTKDGTIAGPRVLEHMVDTVLAFEGE
RSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVANPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQMGAAEVYLNIAGG
YRLTDPAADLAVAAALISAFSERPVPADAIVFGELSLSGEVRQVAHDALRLREAAKLGFS
RGWGPQGMKGVGGISVTGFGRLGELVDLMLGRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcgaagcgtcaatatgtctgccagaattgcgggggcgtctcgtaccgctgg
caggggcagtgcgccgactgcggcgaatggaacacgctggtcgaggaggcggcggagacc
gtcttttcggcgaagcacgacctcagccgcggcgggcgcacgatcgcgctcgaaacgctc
gatgccgacagccggatgcccgagcggatgctgtgcgggattgccgagttcgaccgcgca
ttgggcggcggcttcgtcgcggggtcggcgacgctgatcggcggcgacccggggatcggc
aagtcaaccttgctgctgcaggcggcggggcggctcgcgaaatcgggcaagtcggtcgtc
tatatcagcggcgaggaggcggcggcgcaggtgcggctgcgcgcgcagcggctggggctc
ggccaggcgccggttgcgctcgcgagcgcgacgtcggtgcgcgacatattggcgacgctc
gacgggcgcgatgccgatttcgtcgtgatcgattcgatccagacgatgcacagcgacctg
atcgacagcgcgccgggaacggtgagccaggtgcgcgcgagcgcgcaggaactgatccgc
tatgccaaggacagcgacgccgcgatcgtgctcgtcggccatgtgacgaaggacgggacg
atcgcgggaccgcgcgtgctcgaacatatggtcgacaccgtgctcgcgttcgagggcgag
cgcagccaccaataccgcatcctgcgcgcagtgaagaaccgcttcggcggcaccgacgag
atcggggtgttcgcgatgggcgaggaggggctgggcgaggttgccaatccgtcgagcctg
ttcctgaccgaccgcagccgcgacgtgccggggtcggtggtgtttccggcgctcgaaggc
acgcggccggtgctggtcgaggtgcaggcgctgaccgtccgcctcgcgagcggggcgaca
ccgcgccgcgccgtcgtcggttgggacagcgggcggctggcgatggtgctcgcggtgctc
gaagcgcgctgcgggctccagatgggcgccgccgaagtctatctcaacatcgcgggcggc
tatcgcctcaccgatcccgccgccgacctcgcggtcgccgcggcgctgatctcggcattc
agcgagcggccggtgcccgccgatgcgatcgtcttcggcgaactgtcgctgtcgggcgag
gtgcggcaggtggcgcacgacgccctgcgtctccgcgaagcggcgaagctcggtttttcg
cgtggatgggggccgcaggggatgaagggcgtcggcgggatttcggttaccggtttcggc
cggctcggcgaactcgttgacctgatgctcgggcgcgactag
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