Uncultured Sphingopyxis sp. UC10: SPPYR_3030
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Entry
SPPYR_3030 CDS
T05531
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00220
Arginine biosynthesis
sphu00240
Pyrimidine metabolism
sphu00250
Alanine, aspartate and glutamate metabolism
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SPPYR_3030 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SPPYR_3030 (carB)
00220 Arginine biosynthesis
SPPYR_3030 (carB)
Enzymes [BR:
sphu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SPPYR_3030 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
RimK
MucBP_2
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
SBV34150
UniProt:
A0A1Y5PW20
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All DBs
Position
SPPYR:complement(3178755..3182075)
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AA seq
1106 aa
AA seq
DB search
MPKRTDIQSILVIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPDL
ADATYVEPITPEIVAKIIAKERPDAVLPTMGGQTALNTALALAQDGTLAKYGVEMIGADA
EAIDKAEDRQKFRDAMDKIGLESARSGVAHTLDEAFAVLERTGLPAIIRPSFTLGGTGGG
IAYNREEFEHIVRGGLIASPTTEVLIEESLLGWKEYEMEVVRDRKDNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPDNGRMIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIMNDITGVTPASFEPTIDYVVTKIPR
FAFEKFKGAEATLSTAMKSVGEVMAIGRTIHESLQKALRGLETGLSGFNFVERLKGASHE
QLRNELAQRTPDRLLNTAQAIREGLPLEEINRVAGYDMWFLERIAEIVAAEEQVCRNGLP
RDAEGLRRLKAMGFSDKRLAYLALQSANLQPGASHATARGSGLIHEAVKAMTGGVTEAEV
RALRHKLGVRPVFKTIDTCAAEFRAQTPYLYSTYEAPTFGEPECEANPSERKKVVILGGG
PNRIGQGIEFDYCCCHACFALEEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLE
ILAVEMSKGELVGVIVQFGGQTPLKLAQALAEAGVPILGTSPDAIDLAEDRERFAALVNK
LGLKQPENGIARSREEAVAVAARIGYPVLTRPSYVLGGRAMEIVDDQAQLENYIETAVQV
SGDSPVLIDRYLRDAIEVDVDALCDGTDVVVAGVLQHIEEAGVHSGDSACSIPPYSLPAH
IVAEIERQADALARALEVRGLMNIQFAVKDDEVYLIEVNPRASRTVPFVAKAVGSPIAKI
AARVMAGEKLADLPKINRDIAHVAVKEAVFPFARFPGTDPVLSPEMKSTGEVMGIDRDFN
LAFAKAQLGAGDRLPTTGRLFVSVKDSDKPRIVGAVKRLADWGWKVIATGGTADYLAGQG
VEVERVNKVAEGRPHIVDRIKDGDVQLIFNTTEGWQSLQDSQSIRASALAADIAYYTTAA
ASDASTQAIGALRAHSLEVKPLQDYY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaactgacatccaatccatcctcgtcatcggcgccggcccgatcgttatc
ggtcaggcgtgcgagttcgactattcggggacgcaggcgatcaaggcgttgaaggaggag
ggctatcgtatcgtcctcgtcaactccaatccggcgacgatcatgaccgatcctgacctc
gccgacgcgacctatgtcgagccgatcacgcccgagatcgtcgcgaagatcatcgcgaag
gagcgccccgacgcggtgctgccgacgatgggcgggcagaccgcgctcaacaccgcgctg
gcgctcgcgcaggacggcacgctggcgaaatatggcgtcgaaatgatcggcgccgatgcc
gaggcgatcgacaaggccgaggaccggcagaagttccgcgacgcgatggacaagatcggg
ctcgaaagcgcgcgcagcggcgtcgcgcacacgctcgacgaggcgttcgcggtgctcgaa
cgcaccgggctgcccgcgatcatccgcccgtccttcacgctcggcggcaccggcggcggc
atcgcctataaccgcgaggaattcgagcatatcgtccgcggcgggctgatcgcctcgccg
accaccgaagtcctgatcgaggaatcgctcctcggctggaaagaatatgagatggaggtg
gtgcgcgaccgcaaggacaattgcatcatcatctgctcgatcgagaatgtcgatccgatg
ggcgtgcatacaggcgacagcatcaccgtcgcccccgcgctgacgctgaccgacaaggaa
taccagatcatgcgcaacgcctccatcgcggtgctgcgcgaaatcggcgttgataccggc
ggctccaatgtgcagttcgcggtcaaccccgacaacggccgcatgatcgtcatcgagatg
aacccgcgcgtgtcgcgctcgtcggcgctcgcgtcgaaggcgacgggcttcccgatcgcc
aaggtcgcggcgaagctcgcggtcggctacacgctcgacgagatcatgaacgacatcacc
ggggtgaccccggcgtcgttcgagccgacgatcgactatgtggtgaccaaaatcccgcgc
ttcgcgttcgagaaattcaagggcgctgaggcgaccctgtcgaccgcgatgaaatcggtc
ggcgaggtgatggcgatcggccgcacgatccacgagagcctgcaaaaggcgctgcgcgga
ctggagacggggctttcgggcttcaacttcgtcgagcgattgaagggcgcgagccatgag
cagctgcgcaacgagcttgcgcagcgcacccccgaccggctgctcaacaccgcgcaggcg
atccgcgagggactgccgctcgaagagatcaaccgcgtcgctggctacgacatgtggttc
ctcgaacgcatcgccgaaatcgtcgcggccgaagagcaggtctgccgcaacggcctgccg
cgcgatgccgaggggctgcggcggctgaaagcgatgggcttttccgacaagcgcctcgcc
tatctggcgctgcagtcggcgaacctccagcccggcgccagccatgcgaccgcgcgcggc
agcggcctgatccacgaagcggtcaaggcgatgaccggcggcgtcaccgaggccgaagtg
cgcgcgctgcgccacaagctcggcgtgcggccggtgttcaagacgatcgacacctgcgcg
gcggagttccgggcgcagaccccctatctctattcgacctatgaagccccgaccttcggc
gaacccgagtgcgaggcgaacccgagcgagcggaagaaggtcgttatcctaggcggcggt
ccgaaccggatcgggcaggggatcgagttcgactattgctgctgccatgcctgcttcgca
ctcgaagaggcgggttacgaaacgatcatggtcaactgcaacccggagacggtgtcgacc
gattatgacacgtcggatcgcctctatttcgagccgctgaccgccgaggacgtgctcgaa
atcctggcagtagaaatgtcgaagggcgagctggtgggcgtgatcgtccagttcggcggg
cagacgccgctcaagctcgcccaagccctcgccgaagcgggcgtcccgatcctcggcacc
tcgcccgacgcgatcgatttggccgaggaccgcgagcggttcgcggcgctcgtcaacaag
ctcggcctcaagcagcccgagaacggcatcgcgcgcagccgcgaagaggcggtcgcggtc
gcggcgcgcatcggttatccggtgctgacgcgccccagctacgtgctcggcggccgcgcg
atggagatcgtcgacgatcaggcgcaactcgaaaattatatcgagaccgcggtgcaggtg
tcgggtgacagcccggtgctgatcgaccgctatctgcgcgatgcgatcgaggtcgacgtc
gatgctttgtgcgacggcaccgacgtggtggtcgcgggcgtgctccagcatatcgaggaa
gccggcgtccattcgggcgacagcgcctgctcgatcccgccctacagcctgcccgcgcat
atcgtcgccgagatcgagcggcaggctgacgcgctggcgcgcgcgcttgaggttcgcggg
ctgatgaacatccagttcgcggtgaaggatgacgaagtgtacctcatcgaggtcaacccg
cgcgccagccgcaccgtgcccttcgtcgcgaaggcggtgggctcgccgattgccaagatc
gccgcgcgcgtgatggcgggcgaaaagctcgccgacctgcccaagatcaaccgcgacatc
gcgcatgtcgcagtgaaggaggcggtcttccccttcgcgcgcttccccggcaccgacccg
gtgctgagccccgagatgaaatccaccggcgaagtcatgggaatcgaccgcgatttcaac
ctcgccttcgccaaggcgcagctcggcgcgggcgaccgtctgcccacgaccggccgcctg
ttcgtgtcggtcaaggacagcgacaagccgcgcatcgtcggcgcggtgaagcggctcgcc
gactgggggtggaaggtgatcgcgaccggcggcaccgccgactatctggcggggcagggc
gtcgaggtcgagcgcgtcaacaaggtcgccgagggccgcccgcatatcgtcgaccggatc
aaggacggcgacgtccagctgatcttcaacacgaccgaaggctggcaaagcttgcaggat
tcgcaatcgatccgcgcgtcggcgctcgcggccgacatcgcctattatacgacggcggcg
gcgagcgatgcgtcgacgcaggcgatcggcgcgctccgcgcgcactctcttgaagtaaag
ccgcttcaggactattattga
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