Uncultured Sphingopyxis sp. UC10: SPPYR_3048
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Entry
SPPYR_3048 CDS
T05531
Name
(GenBank) Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPPYR_3048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_3048
Enzymes [BR:
sphu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SPPYR_3048
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPPYR_3048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Bcr-Abl_Oligo
Motif
Other DBs
NCBI-ProteinID:
SBV34168
UniProt:
A0A1Y5PVY5
LinkDB
All DBs
Position
SPPYR:complement(3200329..3201003)
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AA seq
224 aa
AA seq
DB search
MRAAAVSLANPLTDTWRTRVPDEPAPDDDVTTLDALARAIDRCTRCPLYRNATQGVAGEG
PKAARIMLVGEQPGDQEDRQGRPFVGPAGQLLDAALDEAGLDRRRLFLTNAVKHFKFEPR
GKRRLHQNPTIAEIDICRWWLDKERALVEPELIVTLGASALRGVTGRSVSIKSMRGAVHR
LEGGGRLIATVHPSFLLRMPDRTRAAAERAAFVADLIRARKLAA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagcggccgtttcccttgcgaacccgttgaccgatacatggcggacgcgcgtg
cccgacgaaccggcccccgatgatgatgtaacgacgctggacgcgctggcgcgcgcgatc
gatcgctgcacgcgctgcccgctctatcgcaacgcgacgcagggggtcgcgggcgagggg
ccgaaggcggcgcgcatcatgctcgtcggcgagcagccgggcgatcaggaggatcggcag
ggacgccccttcgtcggcccggcggggcagttgctcgacgcggcgctggacgaagcgggg
ctcgaccggcggcggctgttcctcaccaatgcggtcaagcatttcaagttcgagccgcgc
ggcaaacggcggctgcatcagaatccgacgatcgcggagatcgacatctgccgctggtgg
ctcgacaaggagcgggcgctcgtcgaacccgagctgatcgtcacgctcggcgcgagcgcg
ctgcgcggcgtgaccgggcggagcgtgagcatcaagtcgatgcgcggcgcggtgcatagg
ttggaagggggcggcaggctgatcgcgacggtccatccctccttcctgctgcgcatgccc
gaccggacgcgcgccgccgccgagcgcgcggccttcgtcgccgacctgatccgcgcgcgg
aaactcgccgcctga
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