Uncultured Sphingopyxis sp. UC10: SPPYR_3233
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Entry
SPPYR_3233 CDS
T05531
Symbol
yjgR
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_3233 (yjgR)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SPPYR_3233 (yjgR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_10
ResIII
AAA_22
FtsK_SpoIIIE
AAA_30
SLFN-g3_helicase
CAF1A_acidic
AAA
Hydrolase
T2SSE
AAA_7
CbiA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SBV34348
UniProt:
A0A1Y5PWG9
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Position
SPPYR:complement(3380393..3381988)
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AA seq
531 aa
AA seq
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MSDGSTVSEIYIGLGGGGAADGPRQSLVLKRANRHGLIAGATGTGKTVTLQGLAEGFSAA
GVPVFVADVKGDLAGMAMAGSPTAKVHEPFSKRAAEIGDTTWAYRDNPVIFWDLFGEQGH
PIRTTISEMGPLLLARLMGLNEVQEGVLAIAFRVADEQNLLLLDLGDLQAMLAWCAENAD
ELTTRYGNVSKATVGTIQRQLLTLESQGGDHFFGEPALDIQDMIRTDDTGRGYVNILAAD
KLMASPKLYATFLLWLLSEMFETLPEVGDPDKPKLVFFFDEAHLLFDDAPPALTEKIEQV
VRLIRSKGVGVYFVTQNPIDVPEEVAGQLGNRVQHALRAFTPRDQKAVKAAAETFRPNPK
VDVAREITELKVGEALVSLLMADGAPSPVERTLIKPPCSRAGPLEPKERAIIQSISPVAG
KYDTAVDRESAEELLAAKAEQAQAAAIEAKAQAEADKQAAIAAKEEAKRKAAEERERVRL
EKAAAREAAKPSMAEKMIQSAARSAATSLGRQVAGKFGGQLMRGILGSLFK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacggcagcacggtgagcgaaatctatatcgggcttggcggcggcggggcggcc
gacgggccgcgccagtcgctggtgctcaaacgcgcgaaccgccacggcttgatcgccggc
gcgaccggcaccggcaagaccgtgaccctgcaagggcttgccgaaggcttttcggccgcc
ggcgtcccggtcttcgtcgccgatgtgaagggcgacctcgccggcatggcgatggcgggc
agcccgacggccaaggtccatgaacccttttcgaagcgcgccgccgaaatcggcgatacg
acatgggcctatcgcgacaatccggtgatcttctgggacctgttcggcgagcagggacac
ccgatccgcaccaccatctccgaaatgggcccgctgctgctcgcgcggctgatggggctc
aacgaagtgcaggaaggcgtgctcgcgatcgcgttccgggtcgccgacgaacagaatctg
ctgctgctcgatctgggcgatttgcaggcgatgctcgcctggtgcgccgagaacgccgac
gaactcacgaccagatatggcaatgtgtcgaaggccaccgtcggcacgatccagcggcaa
ttgctgacgctcgaaagccagggcggcgaccatttcttcggcgaacccgcgctcgacatt
caggacatgatccgcactgacgacacgggccgcggctatgtcaacatcctcgccgccgac
aaattgatggcgagcccgaagctctatgcaaccttcctgctctggctcttgtcggagatg
ttcgagacgcttcccgaggtcggcgaccccgacaagcccaagctcgtcttcttcttcgac
gaagcgcatctgctcttcgacgacgcgccgcccgcgctcaccgaaaagatcgagcaggtc
gtgcggctgatccgctcgaagggcgtcggcgtctatttcgtgacgcagaacccgatcgac
gtgcccgaggaggtcgcgggccagctcggcaaccgcgtccagcacgcgctccgcgccttt
accccgcgcgaccagaaggcggtgaaggccgccgccgaaaccttccgtccgaaccccaag
gtggacgtcgcgcgcgagatcaccgaattgaaggtcggcgaggcgctcgtctcgctgctg
atggccgacggcgcgccgtcgccggtcgagcgcacgctgatcaagccgccctgctcgcgc
gccggaccgttggagcccaaggagcgcgcgatcatccagtcgatctcgccggtcgcgggc
aagtacgacacggcggtcgaccgcgagagcgccgaggaactgctcgccgccaaggccgag
caggcgcaggccgccgcgatcgaggcgaaagcccaagcggaggccgacaaacaggccgcg
atcgccgcaaaggaagaggcgaagcgcaaggcggccgaggagcgcgaacgcgtccggctc
gaaaaggcggctgcccgcgaggccgccaaaccctcgatggccgaaaagatgatacagtcg
gcggcgcgctcggcggcgacgagcctcggccggcaggtcgcgggcaagttcggcggccag
ctgatgcgcggcattttgggcagtcttttcaagtga
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