Uncultured Sphingopyxis sp. UC10: SPPYR_3320
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Entry
SPPYR_3320 CDS
T05531
Name
(GenBank) Polynucleotide adenylyltransferase region
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPPYR_3320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphu03019
]
SPPYR_3320
Enzymes [BR:
sphu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SPPYR_3320
Messenger RNA biogenesis [BR:
sphu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPPYR_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
DUF6074
Motif
Other DBs
NCBI-ProteinID:
SBV34435
UniProt:
A0A1Y5Q0W7
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All DBs
Position
SPPYR:complement(3476103..3477299)
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AA seq
398 aa
AA seq
DB search
MTRLPAADWRERPGLRRIVAALTADGGAVKAVGGAVRDTLLGLPVADIDLATPLLPEEVR
RRLEAVDIKIIPTGIAHGTVTAIASGDHHEITTLRRDVATDGRRATIAFADDWRDDAARR
DFTINALYADPGTGEIDDWFGGLADLAAGRVAFIGDAATRIAEDHLRILRFYRFAARFGR
GDLDPASHAAVVTARQSLKSLSRERIADELLKILALPDPRAIVGRMAADGIFEVLLPELD
AGFAAALDRLIANERAAAATIAPLRRLAALLLADAGVAEQVASRLRLSTRQRKHLAALGG
HRADVARPIRQLAHAIGIEAARDVHLLAGDPAAVEALSGWAVPQLPLKGGDIVARGVAAG
PEVARILKAVEAQWVAEDFPDAARVARLVDQKIGRTSD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcggcttcccgccgccgattggcgcgagcggccggggctgcgccggatcgtcgcc
gcgctgaccgccgatggcggcgcggtcaaggccgtcggcggcgcggtgcgcgacactttg
ctcggcctgcccgtcgccgacatcgatctcgcgactcccctcttgcccgaggaggtcagg
cggcggctggaggccgtcgacatcaagatcatcccgacgggtatcgcgcacggcaccgtc
accgcgatcgccagcggcgaccatcacgagatcacgacgttgcgccgcgacgtcgcgacc
gacgggcgccgcgcgacgatcgcctttgccgacgactggcgcgacgacgccgcgcgccgc
gacttcacgatcaacgcgctctatgccgatcccggcacgggggagatcgacgactggttc
ggcgggctcgccgatctcgcggcggggcgggtggccttcatcggcgacgccgcgacgcgc
atcgccgaggatcatctgcgcatcctgcgcttctatcgcttcgcggcgcgcttcgggcgc
ggcgacctcgatcccgccagccacgccgcggtggtgaccgcgcgccagtcgctcaaaagc
ctgtcgcgcgagcgcatcgccgacgaactgctcaagatcctcgcgcttcccgacccgcgc
gcgatcgtcggccggatggcggctgacggtattttcgaagtgctgctccccgaactcgat
gccggtttcgcggccgcgctcgaccggcttatcgccaacgaacgcgcggcggccgccacc
atcgcaccgctccgccgcctcgcggcgctgctgctggccgatgccggcgtcgccgagcag
gtcgcgagccggctccgtctctcgacgcggcagcgcaagcatctggccgcgctcggcggc
caccgcgccgacgtcgcgcgcccgatccgtcagctcgcgcacgcgatcggtatcgaggcg
gcgcgcgacgtccacctcctcgccggcgatcccgccgccgtcgaagccttgtcgggctgg
gcggttccgcagcttccgctgaagggcggcgacatcgtggcgcgcggggtcgccgccgga
cccgaagtcgcgcgcatcctgaaagcggtcgaagcgcaatgggtggccgaggattttccg
gacgcggcgcgcgtggcgcggctcgtcgatcagaagatcggccgcaccagcgactga
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