Uncultured Sphingopyxis sp. UC10: SPPYR_3335
Help
Entry
SPPYR_3335 CDS
T05531
Name
(GenBank) Transcriptional regulator, LysR family
Organism
sphu
Uncultured Sphingopyxis sp. UC10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
HTH_20
HTH_AsnC-type
DUF5791
Motif
Other DBs
NCBI-ProteinID:
SBV34450
UniProt:
A0A1Y5PWW2
LinkDB
All DBs
Position
SPPYR:complement(3488261..3489172)
Genome browser
AA seq
303 aa
AA seq
DB search
MSINRVSLYHLETLLWIDRLGTFSAAAERLNTTQPTVSARMRELEQRLGTALFRREGRAM
SLTAAGRKLVRDCDPLLRDMQYALLGSGGYGEASGVVRIGAGEIAAASCLPAFVAELKAD
MPGVGLEIEIDLTANLIQQLLTGRTDMAFAAGPIAHPALKTSPIGEVELLWLASPAVASA
FASGEAVLPVWSLASHSPIHGRMRDAIAASRIAQKSVNLCNNARMMIDIARVGGGIGIFP
EPMVRGEIASGALVELDGMPALVPVEFHVAKRVSDTEPVLDRIYARAATLRIAAASRDFD
GDQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaatcgcgtctcgctctatcatctagaaaccctcctctggatcgaccggctc
ggcactttttctgcggcggccgagcggctcaacaccacccagccgacggtgtcggcgcgg
atgcgcgaactcgaacagcgattggggacggcgctgttccgccgcgaaggccgcgcgatg
tcgctgacggcggcggggcgcaagctggtgcgcgattgcgaccccttgctgcgcgacatg
caatacgcgctgctcggcagtggcggctatggcgaggcgagcggcgtggtgcgcatcggc
gcgggcgagatagcggcggcaagctgccttcccgctttcgtcgcggaactcaaggccgac
atgccgggcgtcgggctcgagatcgagatcgacctcaccgccaacctgatccagcagctt
ttgaccgggcgcaccgacatggccttcgccgccgggccgatcgcgcatcccgcgctcaag
actagtccgatcggcgaggtcgaactgctctggcttgcgagccccgcggtcgcatcggcc
ttcgcgagcggggaggcggtgctccccgtctggtcgctcgccagccattcgccgatccac
gggcggatgcgcgatgcgatcgccgcgtcgcgcatcgcgcagaaatcggtgaatttgtgc
aataatgcgcgtatgatgatcgacatcgccagagtcggcggcgggatcggcatctttccc
gaacctatggtgcgcggcgaaatcgcgagcggcgcgctggtcgagctcgatggcatgccc
gcgctcgtgccggtcgaatttcacgtcgccaagcgcgtgtccgacaccgaacccgtgctg
gaccggatttatgcgcgcgcggcgacgctgcgtatcgcggcggcctcgcgcgactttgac
ggcgatcaatga
DBGET
integrated database retrieval system
