Uncultured Sphingopyxis sp. UC10: SPPYR_3352
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Entry
SPPYR_3352 CDS
T05531
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00300
Lysine biosynthesis
sphu01100
Metabolic pathways
sphu01120
Microbial metabolism in diverse environments
sphu01230
Biosynthesis of amino acids
Module
sphu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPPYR_3352 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphu01002
]
SPPYR_3352 (dapE)
Enzymes [BR:
sphu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SPPYR_3352 (dapE)
Peptidases and inhibitors [BR:
sphu01002
]
Metallo peptidases
Family M20
SPPYR_3352 (dapE)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
SBV34467
UniProt:
A0A1Y5Q3W4
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All DBs
Position
SPPYR:3502505..3503641
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AA seq
378 aa
AA seq
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MTHAIDPVELAKTLIAAPSVTPATGAVFDAIEAALTPLGFTVERFIDGIEPDGPVENLLA
VREGKGPKHFGFAGHLDVVPPGVGWTGDAFAPEVRGDLLYGRGAVDMKGAIAAFVAAAAA
TPADAGTISLIITGDEEGPAIFGTRALMEHMDARGVKPDMIVVGEPTSVGRLGDMVKIGR
RGSVNIWIDVPGTQGHVAYPHLADNPIPKLVKILAAIDAVTLDEGNDWFQPSNIEFTDVE
VGNGATNVIPASARARLSIRFNDAHKGADLVAMIERIAHEVEPNAKVLGKISGEAFLTPP
GELSELVAEAIHAETDLRPEMSTTGGTSDARFLHALCPVVEFGLTNATMHKLDEAVAVAD
LRTLTAIYRGILMRALLD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgccatcgaccccgtcgaactcgccaagacgctgatcgccgcgccgagcgtc
acccccgccaccggcgccgtgttcgacgcgatcgaggccgcgctgacgccgctgggcttt
accgtcgagcggttcatcgacgggatcgagcccgacgggccggtcgagaatctgctcgcg
gtgcgcgaaggaaaagggccgaaacatttcggctttgccgggcacctcgacgtcgtgccg
ccgggcgtcggctggaccggcgatgccttcgcgcccgaagtgcgcggcgatctgctctat
ggccgcggcgcggtcgacatgaagggggcgatcgcggccttcgtcgccgccgccgccgcg
acgcccgccgacgcgggcacgatcagcctgatcatcaccggcgacgaggaaggccccgcg
atcttcggcacgcgcgcgctgatggagcatatggacgcccgcggcgtgaagcccgacatg
atcgtcgtcggcgagccgacgtcggtgggccggctcggcgacatggtgaagatcgggcgg
cgcggctcggtcaatatctggatcgacgtgcccggaacgcagggccatgtcgcctatccg
cacctcgccgacaatccgatccccaagctggtgaagatattggcggcgatcgacgcggtg
acgctcgacgaaggcaacgactggttccagccgtcgaacatcgaattcaccgacgtcgaa
gtcggcaacggcgcgaccaacgtcatccccgcctcggcgcgcgcgcggctctcgatccgc
ttcaacgatgcgcacaagggcgccgacctcgtcgcgatgatcgagcggatcgcgcatgag
gttgaaccgaatgcgaaagtgctcggcaagatttcgggtgaggctttcctgactccgccg
ggcgagttgtccgaactcgtcgccgaggcgatccatgccgaaaccgacctccgccccgaa
atgtcgacgaccggcggcacgtcggacgcgcgctttctccacgcgctctgcccggtggtc
gaattcgggctgaccaatgcgacgatgcacaagctcgatgaggccgtggcggtggcggat
ctgcgcacgctgaccgccatctatcgcgggatattgatgcgggctttgctcgattga
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