Uncultured Sphingopyxis sp. UC10: SPPYR_3359
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Entry
SPPYR_3359 CDS
T05531
Symbol
trpS
Name
(GenBank) Tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPPYR_3359 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphu01007
]
SPPYR_3359 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphu03016
]
SPPYR_3359 (trpS)
Enzymes [BR:
sphu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SPPYR_3359 (trpS)
Amino acid related enzymes [BR:
sphu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SPPYR_3359 (trpS)
Transfer RNA biogenesis [BR:
sphu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPPYR_3359 (trpS)
Prokaryotic type
SPPYR_3359 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
SBV34474
UniProt:
A0A1Y5Q4S6
LinkDB
All DBs
Position
SPPYR:3509013..3510020
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AA seq
335 aa
AA seq
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MRTLSGIQPTGNLHLGNYLGAIRNWVRMQDEMAGDKLYFLADLHAISMPHIPAELTANTR
AMTAALVACGIDTDRSILFNQARVPAHAELQWLLNGTARLGWLNRMTQFKDKSGKNRESA
SAALYTYPVLQAADVLLYQTTHVPVGEDQKQHLELARDVAQKFNNDYASEDKPVFTLPEP
IIPAGMARIMSLRDGAAKMSKSDPSDMSRINLTDDADTMMQKVRKAKTDPEVLPSEAAGL
EGRPEARNLVGIYAALADTSVDAVLRDHAGQGFGAFKPALGELLIEKLAPINARFVALKD
DAAALDAILDKGAEKARALAKPTLDAAYAALGLCR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgctatcgggcatccagcccaccggaaatttgcacctcggcaattatctgggc
gcgatccgcaactgggtgcgcatgcaggacgagatggcgggcgacaagctctatttcctc
gccgatctgcacgcgatctcgatgccgcacatccccgccgagctcaccgccaacacgcgc
gcgatgaccgccgcgctcgtcgcgtgcgggatcgacaccgaccgctcgatcctcttcaac
caggcgcgcgttccggcgcatgccgaactgcaatggctgctgaacggcaccgcacggctc
ggctggctcaaccgcatgacgcagttcaaggacaagtcgggcaagaatcgcgaaagcgcg
tcggcggcgctctatacctatcccgtgctgcaggcggccgacgtgctgctctatcagacg
acgcacgttcccgtgggcgaggaccagaagcagcatctcgagctggcgcgcgacgtcgcg
cagaagttcaacaacgactatgccagcgaggacaagccggtgttcacgctgcccgagccg
atcatcccggcgggcatggcgcgcatcatgagcctgcgcgacggcgccgcgaaaatgtcg
aagtccgacccgtcggacatgagccgcatcaacctgaccgacgacgccgacacgatgatg
caaaaggtccgcaaggcgaagaccgatcccgaggtgctgccgtccgaagccgcggggctc
gaaggacgccccgaggcgcgcaaccttgtcggcatctatgccgcgctcgccgacacgagc
gtcgatgcggtgctgcgcgaccatgcggggcaagggttcggggcgttcaagcccgcgctc
ggcgaactgctgatcgaaaaactcgcgccgatcaacgcgcgcttcgtcgcgctgaaggac
gatgccgcggcgctcgacgcgatcctcgacaagggtgccgaaaaggcacgcgcgctcgcc
aagccgacgctcgacgcggcctatgccgcattggggctctgccgctag
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