Uncultured Sphingopyxis sp. UC10: SPPYR_3433
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Entry
SPPYR_3433 CDS
T05531
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPPYR_3433 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_3433 (ung)
Enzymes [BR:
sphu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SPPYR_3433 (ung)
DNA repair and recombination proteins [BR:
sphu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPPYR_3433 (ung)
Prokaryotic type
SPPYR_3433 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SBV34548
LinkDB
All DBs
Position
SPPYR:complement(3594285..3594995)
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AA seq
236 aa
AA seq
DB search
MGMAEVKLHPDWLARIGGEFEQPYMAALKQYLADERAKGKAIFPRPRDWFAALDATPPQE
VRVVILGQDPYHGPGQAHGLCFSVQPGVRTPPSLVNIYKEMQADLGIPPARHGYLKHWAE
QGVLLLNNCLTVESGMAASHQGKGWERFTDAAVAAVAADPAPKVFILWGSHAQKKAANVP
GLGPDGPHLILRAPHPSPLSAHNGFFGSRPFSQANAFLEAKGRGAIDWRLPEKPEA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggccgaggtcaaactgcatcccgactggctcgcccgcatcggcggcgagttc
gagcagccctatatggcggcgctcaagcaatatcttgcggatgagcgcgcgaagggcaag
gcgatctttccgcggccgcgcgactggttcgcggcgctcgatgcgacgccgccgcaggaa
gtccgcgtggtgatattggggcaggacccctatcacgggccggggcaggcgcacgggctt
tgcttctcggtgcagccgggcgtgcggacgccgccgagcctcgtcaacatctacaaggaa
atgcaggccgacctcggcattccgcccgcgcgccacggctatctcaagcattgggcggag
cagggcgtgctgctgctcaacaattgcctgacggtcgaaagcggcatggccgcgtcgcat
cagggcaaggggtgggagcgtttcaccgacgccgcggtcgccgcggtcgccgccgatccg
gcgcccaaggtcttcatcctgtggggcagccatgcgcagaagaaggcggcgaacgtgccg
gggctggggcccgatggcccgcacctgatcctgcgcgcgccgcacccctcgccgctgtcg
gcgcacaatggctttttcgggtcgcggccgttcagccaggcgaacgcctttctggaagcg
aaggggcgcggcgcgatcgactggcgcttgccggagaagcccgaagcgtga
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