Uncultured Sphingopyxis sp. UC10: SPPYR_3705
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Entry
SPPYR_3705 CDS
T05531
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03030
DNA replication
sphu03430
Mismatch repair
sphu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPPYR_3705
03430 Mismatch repair
SPPYR_3705
03440 Homologous recombination
SPPYR_3705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphu03032
]
SPPYR_3705
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_3705
Enzymes [BR:
sphu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPPYR_3705
DNA replication proteins [BR:
sphu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPPYR_3705
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPPYR_3705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
SBV34820
UniProt:
A0A1Y5PXY3
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Position
SPPYR:complement(3884416..3885447)
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AA seq
343 aa
AA seq
DB search
MKSVKPADLERQTRLDPAVRFTLLTGPDEATMEAVAGRLIGLAGKDAERLDLTGSQLSQD
PSLLAAEAASMSLFSPSRIIKLELSGSGDDSLAAVEALLTAETAINPVVATGASVTAKSK
LVKLVEASDHAVAAICYQPDRRALVGIAMAAAQEQGLRIANSEAQLLVDLVSGDQALMRR
EIEKIALYLDAGPDRQRQVTPADIAALGAATHEEDVSECINVALGGKVRDLPEMLTKAAA
VGVAEIRIIRALAIRALALARLRAEVDGGAHPATVVSARSSGIFWKERDAVTAQLHIWDS
VRIARLMTRLLDCERALKASGTAGAVLFRKLMTDIAHQAARAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgtcaagcccgccgacctcgaacgccagacgcgcctcgatcccgcggtccgc
ttcaccctcctcaccggccccgacgaagcgacgatggaagccgtcgccggccgtctgatc
ggccttgccggcaaggatgccgagcggctcgacctgacgggatcgcagctgtcgcaagac
ccgtcgctgctcgccgccgaagccgcgtcgatgtcgctcttttcgccgagccggatcatc
aagctcgaactgtcgggcagcggcgacgacagcctcgccgcggtcgaagcattgctcacc
gccgaaaccgcgatcaacccggtcgtcgcgaccggcgcctcggtcaccgccaagtcgaag
ctcgtcaagctggtcgaagcgtcggaccatgccgtcgccgcgatctgttaccagcccgac
cggcgcgcgctcgtcggcatcgcgatggcggcggcgcaggagcaggggctgcgcatcgcc
aacagcgaggcgcaattgctcgtcgacctcgtttcgggcgaccaggcgctgatgcgccgc
gagatcgagaagatcgcgctctatctcgacgccgggcccgatcgtcagcggcaggttacg
cccgccgacatcgccgcgctgggcgccgcgacgcacgaggaggatgtcagcgagtgcatc
aatgtcgcgctcggcggcaaggtgcgcgacctgcccgagatgctgaccaaggcggcggcg
gtcggcgtcgccgagatccgcatcatccgcgcgctcgcaatccgcgcactcgcgctcgcc
cgcctgcgcgccgaagtcgacggcggcgcgcatccggcgaccgtcgtctcggcgcgatcg
agcggcattttctggaaggaacgcgacgcggtgaccgcgcagctgcatatctgggattcg
gtgcgcatcgcgcggctgatgacccggctgctcgactgcgagcgcgcgctcaaggcgtcg
ggcaccgcgggcgcggtgctgttccgcaagctgatgaccgatatcgcccatcaggccgca
cgagcacgctag
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