KEGG   Uncultured Sphingopyxis sp. UC10: SPPYR_3756
Entry
SPPYR_3756        CDS       T05531                                 
Name
(GenBank) DEAD/DEAH box helicase-like protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sphu  Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:sphu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphu03400]
    SPPYR_3756
Enzymes [BR:sphu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SPPYR_3756
    5.6.2.6  RNA 3'-5' helicase
     SPPYR_3756
DNA repair and recombination proteins [BR:sphu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SPPYR_3756
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: SBV34871
UniProt: A0A1Y5PXZ7
LinkDB
Position
SPPYR:complement(3935981..3938398)
AA seq 805 aa
MQLPAPFADWFAARGWRLRRHQADMLGASARGEHALLVAATGAGKTLAGFLPSLVDLARN
PSDRLHTLYVSPLKALAADVERNLLGPIAEMGLDISVESRSGDTSSDKKARQRSRPPNIL
LTTPESLSLLLSYPDSFTMFAHLKTVVIDEIHAFAPGKRGDLLSLALSRLQTIAPGLRRV
GLSATIADPVRYAGWLAPEADAGAVTLVEGEAGAEPDIEILLPEGAVPWAGHSGRWAVHQ
VMEVIARNRTTIIFCNTRGLAELIFQELWKVNDLSLPIAIHHGSLDREARQRAEAAMAEG
RLRALVATASLDLGLDWGDVDCVIQMGAPKGSSRLLQRIGRANHRLDEPSKALIVPGNRF
EYLEAQAALDAVEAGERDADRFRPGALDVLAQHVMALACAAPFDESGLLAEIRSATPYRW
IDADIFARLLGFVRDGGYALKSYDRFRRLAPDGPGKWRIAHPRLAAQHRLNAGIIVEAPM
ADVRFKNGRRLGKVEEYFASTLTPGDTFAFAGLSLEVEAIRDTDLIVRATTRPARIPSYM
GARLAISTRLADRVRTFLADPASWARFPEDVRFWLEMQALRSALPRPGELLVETFPHEGH
HYLVCYPFEGWNAHQSLGMLITKRMERAGLQPLGFVASDYAIAIWSLRPVAYPQNLFDAE
ILSEEFVEWVEHSHLLKRAFREVAVIGGLIERQHPGKRKTGKQVTFSTDLIFDVLRKYEP
DHLLLEAAWADARERLTDVARLSDLLDRAAGTMLHKTLDRISPLAIPVLVLIGRENVAAS
DLDDMLLGELADTLAEEAMRVDPQE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgcagctccccgcccccttcgccgactggttcgccgcgcgcgggtggcggctgcggcgg
catcaggccgatatgctcggcgcgagcgcgcggggcgagcatgccttgctcgttgcggca
accggggcgggcaagacgctggcggggttcctgccgagcctcgtcgatctcgcccgaaat
ccgtccgaccggctccacaccctctatgtttcgccgctgaaagccttggcggccgacgtc
gagcgcaacctcctcggtccgatcgccgagatgggactcgacatcagcgtcgaaagccgc
agcggcgacacgtcgtcggacaagaaggcgcgccagcgcagccgcccgccgaacatcctg
ctgacgacgcccgaatcgctgtcgctgctgctttcctatcccgacagcttcacgatgttc
gcgcatctgaagacggtggtgatcgacgagatccacgcctttgcgccgggcaagcgcggc
gatttgctcagtctcgcgctgtcgcggctccagacgatcgcgccggggctgcgccgcgtc
gggctgtcggcgacgatcgccgatccggtgcgatatgccggctggctcgcccccgaagcc
gacgccggcgcggtcaccctcgtcgagggcgaagcaggcgccgagcccgacatcgagata
ttgctgcccgaaggcgcggtgccctgggcggggcattcggggcgctgggcggtgcatcag
gtgatggaggtgatcgcccggaaccgcacgacgatcatcttctgcaacacgcgcgggctc
gccgagctgatctttcaggagctgtggaaggtcaacgacctcagcctgccgatcgcgatc
caccacggcagtctcgaccgcgaagcgcgccagcgcgccgaggccgcgatggccgaggga
cggctgcgcgcactcgtcgcgaccgcgagcctcgacttggggctcgactggggcgacgtc
gattgcgtgatccagatgggcgcgcccaaggggtcgtcgcgattgctccagcgcatcggg
cgcgcgaaccaccggctcgacgagccgagcaaggcgctgatcgtgcccggcaaccgcttc
gaatatctcgaagcgcaggcggcgctcgacgcggtcgaagcgggcgagcgcgatgccgac
cgcttccgccccggcgcgctcgacgtgctcgcgcagcatgtgatggcgcttgcctgcgcg
gcgccgttcgacgagtctggactgctcgccgaaatccggagcgcgacgccctatcggtgg
atcgatgccgacatcttcgcgcgattgctcggcttcgtgcgcgacggcggctatgcgctc
aaaagctacgaccgcttccgccgcctcgcccccgacgggccgggcaagtggcggatcgcg
catccgcggctcgccgcgcagcaccggctcaatgcggggatcatcgtcgaagcgccgatg
gccgacgtccgcttcaagaacggccggcggctcggcaaggtcgaggaatatttcgccagc
acgctgacccccggcgacaccttcgcctttgccggtttgagcctcgaggtcgaggcgatc
cgcgataccgacctgatcgtccgcgcgacgacgcgcccggcgcgtattccgagctatatg
ggggcgaggctcgcgatctcgacgcggctcgccgaccgggtgcggactttcctggccgat
ccggcgagctgggcgcgttttcccgaggatgtgcgcttctggctcgaaatgcaggcgctg
cgctcggcgctgccgcggccgggcgaactgctcgtcgagaccttcccgcacgaaggacat
cattatctcgtctgctatccgttcgagggctggaacgcgcaccagtcgctggggatgctg
atcacgaaaaggatggaacgcgccgggttgcaacccttgggcttcgtcgcctccgactat
gcgatcgcgatctggtcgctgcggcccgtggcgtacccccagaacctgttcgatgccgag
atattgtccgaagagttcgtcgaatgggtcgaacactcgcacctgttgaagcgcgccttc
cgcgaggtcgcggtgatcggcgggctgatcgagcgccagcatccgggcaagcgcaagacg
ggcaagcaggtcaccttctcgaccgacctgatcttcgacgtgctgcgcaaatatgagccc
gaccatctgctgctcgaagccgcgtgggccgacgcgcgcgagcggctgaccgacgtcgcg
cggctcagcgacctgctcgaccgcgcggcggggacgatgctgcacaagacgctcgaccgg
atcagcccgctcgccatccccgtgctggtgctgatcgggcgcgagaatgtcgcggcgtcc
gacctcgacgacatgctgctcggcgaactcgccgatacgctggccgaagaagcgatgcgc
gttgacccgcaggaatag

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