Uncultured Sphingopyxis sp. UC10: SPPYR_3816
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Entry
SPPYR_3816 CDS
T05531
Symbol
thiC
Name
(GenBank) thiamin (pyrimidine moiety) biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00730
Thiamine metabolism
sphu01100
Metabolic pathways
sphu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SPPYR_3816 (thiC)
Enzymes [BR:
sphu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SPPYR_3816 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
SBV34931
UniProt:
A0A1Y5PY50
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All DBs
Position
SPPYR:complement(3991096..3993075)
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AA seq
659 aa
AA seq
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MADIDSRLDKRAAEPIGVTTGPIRGSRKVHIASPTGSGIRVAMREIDLDPHSGEPSVRVY
DTSGPYTDPNARIDIAQGLPELRAAWIRARGDVEDVTQREVRPEDNGQLGPDRSGGVPAF
PNVRKTVLRAKPGANVSQMHYARRGIITPEMEYVATRENLGRERLADYVRDGQDWGASIP
DYVTPEFVREEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDK
MVWSIRWGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEELTWEIF
RDTLIEQAEQGVDYFTIHAGVRLPYVPLAAKRVTGIVSRGGSIMAKWCLAHHKESFLYER
FDEITEIMKAYDIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIEGP
GHVPMHKIKENMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCY
VTPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSKARFEFRWDDQFNL
AKSAACAAIWDNALSKARFEFRWRDQFNLSLDPDTAEQYHDQTLPAEGAKSAHFCSMCGP
KFCSMKISQEVREFAKLQNQDSAGFLAAEEAEKGMAKMSEVYEETGRELYMGAGGREHD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgattcccgcctcgacaaacgcgccgccgaaccgatcggcgtcaccacc
ggcccgatccgcggcagccgcaaggtccacatcgcctcgcccaccggcagcggcatccgc
gtcgcgatgcgcgagatcgacctcgacccgcactcgggcgaacccagcgtccgtgtctac
gacacctcgggtccctacaccgaccccaacgcccgcatcgacatcgcgcagggcctcccc
gaacttcgcgcagcctggatccgcgcgcgcggcgacgtcgaggacgtcacccagcgcgag
gtccgccccgaggataacggccagctcggccccgaccgcagcggcggcgtccccgccttc
cccaacgtccgcaagaccgtgcttcgcgccaaacccggcgcgaacgtcagccagatgcac
tatgcccgccgcggcatcatcacccccgagatggaatatgtcgcgacccgcgagaatctc
ggccgcgaacgcctcgcagactatgtccgcgacgggcaggactggggcgcgagcatcccc
gattacgtcacccccgaattcgtccgcgaagaggtcgcgcgcggccgcgcgatcatcccc
agcaacatcaaccaccccgaaagcgagccgatggcgatcggccgcaatttcctcgtcaag
atcaacgccaatatcggcaacagcgcggtcgcgtccgacgtcgccagcgaagtcgacaag
atggtctggtcgattcgctggggcgccgacaccgtcatggacctctcgacggggcgcaac
atccacgacacgcgcgaatggatcatccgcaactcgcccgtcccgatcggcaccgtcccc
atctatcaggcgctcgaaaaggtcggcggcatcgccgaggaactgacgtgggagattttc
cgcgacacgctgatcgaacaggccgagcagggcgtcgactatttcaccatccatgcgggc
gtccgcctgccctacgtcccgctcgccgcaaagcgcgtcaccggcatcgtcagccgcggc
ggcagcatcatggcgaaatggtgcctcgcgcatcacaaggaatcgttcctctacgaacgc
ttcgacgagattaccgagatcatgaaggcctatgacatcgcctacagcctcggcgacggc
ctccgccccggcagcatcgccgacgcgaacgacgaggcgcagttcgccgagctctacacg
ctgggcgagctgaccaagcgtgcgtgggagcaggatgtgcaggtgatgatcgagggcccg
ggccacgtcccgatgcacaagatcaaggagaatatggacaagcagctcgaggcatgcggc
gaggcgcccttctataccttggggccgctcaccaccgacatcgcgccgggctacgaccat
atcaccagcggcatcggcgccgcgatgatcggctggtacggcaccgcgatgctctgctac
gtcacgcccaaggagcatctgggactgcccgaccgcgacgatgtgaaggtcggcgtcgtc
acctacaagctcgccgcgcacgccgccgaccttgccaagggtcatcccgccgccaaggtc
cgcgacgacgcgctatcgaaagcgcgcttcgaattccgctgggacgaccagttcaacttg
gccaagtccgccgcgtgcgcggcgatttgggacaacgcgctgtcgaaggcgcgcttcgaa
ttccgctggcgcgaccagttcaacctgagcctcgaccccgacacggccgagcagtaccac
gaccagacgctcccggccgagggcgccaaatcggcgcatttctgcagcatgtgcggcccc
aaattctgctcgatgaagatcagccaggaagtccgcgagttcgcgaagctgcaaaatcag
gacagcgccggcttcctcgccgccgaagaggccgaaaagggcatggcgaaaatgagcgag
gtttatgaggaaaccgggcgcgagctgtatatgggcgcgggtggccgggagcatgattga
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