Uncultured Sphingopyxis sp. UC10: SPPYR_3849
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Entry
SPPYR_3849 CDS
T05531
Name
(GenBank) Cold-shock DNA-binding protein family
Organism
sphu
Uncultured Sphingopyxis sp. UC10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
S1CSD-TOTE-2
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
SBV34964
UniProt:
A0A1Y5Q648
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Position
SPPYR:complement(4020599..4021348)
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AA seq
249 aa
AA seq
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MSFNKDRRGHRGRGKRDDFGNFDSFEPAPYGGDSYGGGRGGFGDRDRGGFGGGDRGGFGG
GDRGGGFGGGRGGGMPAQVVGEGQGTVKFFNASKGFGFVARDDGGEDVFVHISAVEQAGL
QGLASGQPLGFTLVERNGKVSAIDLKIEGEPLPIEEFAPRQRDGDRPGGARGRRQLTGER
TSGTVKFFNTTKGFGFIARDDGQADAFVHISAVQRAGMAGLDEGDRVAFDIEVDDRGKFA
AVNLQPHQD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaacaaggatcgccgcggccatcgcgggcgcggcaagcgcgatgatttcggc
aatttcgacagcttcgaaccggccccctacggcggcgacagctatggcggcggtcgtggc
ggtttcggcgatcgtgatcgcggcggcttcggcggcggcgatcgcggcggcttcggtggc
ggcgaccgcggtggcggcttcggcggcggacgcggcggcggcatgccggcgcaggtcgtc
ggcgagggccagggcacggtgaaattcttcaacgcatcgaagggcttcggcttcgtcgcc
cgcgacgatggcggcgaagacgtgttcgtccacatcagtgcggtcgaacaggcgggcctc
cagggcctcgcctcgggccagccgctcggcttcacgctcgtcgagcgcaacggcaaggtg
tcggcgatcgacctcaagatcgagggcgagccgctcccgatcgaggaattcgctccgcgc
cagcgcgacggcgaccgtccgggcggcgcgcgcggccggcgccagctgaccggtgagcgg
acctcgggcaccgtcaaattcttcaacacgacgaagggcttcggcttcatcgcgcgcgac
gacggacaggccgacgccttcgtccacatcagcgcggtgcagcgcgccggcatggcgggc
ctcgacgaaggcgaccgcgtcgctttcgacatcgaagtcgacgaccgcggcaagttcgcc
gcggtgaacctccagccgcatcaggactga
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