Uncultured Sphingopyxis sp. UC10: SPPYR_3873
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Entry
SPPYR_3873 CDS
T05531
Symbol
cobD
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00860
Porphyrin metabolism
sphu01100
Metabolic pathways
sphu01240
Biosynthesis of cofactors
Module
sphu_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SPPYR_3873 (cobD)
Enzymes [BR:
sphu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
SPPYR_3873 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
VEGFR-2_TMD
Motif
Other DBs
NCBI-ProteinID:
SBV34988
UniProt:
A0A1Y5PY87
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All DBs
Position
SPPYR:complement(4059291..4060229)
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AA seq
312 aa
AA seq
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MAEPVALAALALDAALGWPDALYRRVGHPVGLFAHIITGCEARWNRARYGFAKRRALGVL
TLLILLLVAGGLGFGIQHMLLAAFGGWGWIGVAILAWPALAQRSLFDHVRAVGDRIDAGD
LPAARDAVARIVGRDTAALDEAGVARAAIESLAESLCDGVAAPLFWLLLLGLPGVWAYKA
VNTADSLIGHREERWRAFGWAAARTDDLANWIPARVTGALICIAGGGGWRILRRDARKHA
SPNAGWPEAAMAGALGLRLAGPIAYDGVMHDKPWIGDGTSDADGSDIGRALAVYRRACLL
LWLIAGGAAWLR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcccgtggcgctcgcggcgcttgcgctcgacgcggcgctcggctggcccgat
gcgctctatcgccgcgtcggccatccggtcgggctgttcgcgcacatcatcaccggctgc
gaggcgcgctggaaccgggcccgatatggctttgcgaagcggcgcgcgctgggcgtgctg
acgctcctgatcctgctgctcgtcgcgggcggccttggcttcggcatccagcatatgctg
ctcgcggccttcggcggctggggttggatcggcgtcgcgattctcgcctggcccgcgctc
gcgcagcgcagtctgttcgaccatgtccgcgcggtcggcgatcggatcgacgcgggcgac
ctgcccgccgcgcgcgatgcggtcgcgaggatcgtcgggcgcgacaccgccgcgctcgat
gaagccggagtcgcgcgcgccgcgatcgaaagcctcgccgaaagcctttgcgacggcgtc
gccgcgccgcttttctggctactgctgctcggcttgcccggcgtgtgggcgtataaggcg
gtcaacaccgccgacagtttgatcggccaccgcgaggagcgctggcgtgcgttcggctgg
gcggcggcacgcaccgacgacctcgcgaactggattccggcgcgggtgacgggcgcgctg
atctgcatcgcgggcggcggcggatggcgcatattgcggcgcgacgcgcgcaaacacgcc
tcgcccaacgcgggctggcccgaggcggcgatggcgggcgcgctggggcttcggctcgcg
ggaccgatcgcctatgacggcgtgatgcacgacaagccatggatcggggacgggacaagc
gatgcggacggtagcgacatcggccgcgcgctcgccgtctatcggcgcgcctgcctgctg
ctgtggctgatcgcagggggcgcggcatggctgcgctga
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