Streptomyces phaeolivaceus: F9278_09455
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Entry
F9278_09455 CDS
T07107
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sphv
Streptomyces phaeolivaceus
Pathway
sphv00040
Pentose and glucuronate interconversions
sphv01100
Metabolic pathways
sphv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
F9278_09455
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F9278_09455
Enzymes [BR:
sphv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
F9278_09455
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QFQ96395
UniProt:
A0A5P8JZG6
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Position
complement(1998784..2000091)
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AA seq
435 aa
AA seq
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MRPHIWHAHAAAALVGCTALVLGAAGTGVAQSQGRDLGRQVLGAGDGWGSAVGGTTGGSA
ADASHVYTVTTWAEFKAALRAGGDAPKIIKVKGMIDAVSEGCESFVTGGYDLQQYLKDYD
PAVYGNDQVAKGPQEDARVASMANQDSAIKAAVPSNTTIVGVGKNSGILGGSLQIKAVSN
VIMRNLTIEAPLDCFPKWDPTDDNNTGNWNSEYDAVVVYGTDHVWLDHNTFTDGRYPDSE
RPSYFGKVFQQHDGLTDIVRGSNYVTVSWNRFQNHDKNMLIGNGDGHVADDTGKLKVTLH
HNRFDGILQRSPRVRFGQVDVYNNHYVVAEEQKHDYHLFGVGFRSQLHASDNAISLPAGA
SVGKTLKKWNESPLTAENNYVNGRLTDLIAVHNAEIPAEILQSGAGWTPTLRTEVDSPRA
VPGIVAGGAGAGKVC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcatatctggcatgcccatgccgcagcggctctcgtcggctgcaccgcgctc
gtgctcggtgccgccgggaccggtgtcgcccagtcccaggggcgggacctcggccggcag
gtcctcggcgccggtgacggctggggttcggcggtgggcgggaccaccggcggttcggcc
gccgacgcctcgcacgtctacaccgtcaccacctgggccgagttcaaggccgcgctgaga
gccggcggtgacgcgccgaagatcatcaaggtgaaggggatgatcgacgccgtctccgag
gggtgcgagtccttcgtcacgggcggctacgacctccagcagtacctcaaggactacgac
ccggccgtctacggcaacgaccaggtcgccaagggcccccaggaggacgcgcgggtcgcg
tccatggcgaaccaggactcggcgatcaaggccgccgtcccgtccaacaccaccatcgtc
ggcgtcggcaagaactccggcatcctcggcggcagcctccagatcaaggccgtctccaac
gtcatcatgcgcaacctcaccatcgaggcgccgctcgactgcttccccaagtgggacccg
acggacgacaacaacaccggcaactggaactccgagtacgacgccgtggtcgtctacggc
accgaccacgtctggctggaccacaacacgttcaccgacggccgctaccccgacagtgag
cggccgagctacttcggcaaggtcttccagcagcacgacggcctcacggacatcgtgcgc
ggctccaactacgtgaccgtctcctggaaccgcttccagaaccacgacaagaacatgctg
atcggcaacggcgacggccacgtggccgacgacaccggcaagctcaaggtcaccctgcac
cacaaccgcttcgacgggatcctccagcgctccccgcgcgtgcggttcggacaggtcgac
gtctacaacaaccactacgtggtggccgaggagcagaagcacgactaccacctcttcggc
gtcggcttccgctcgcagctgcacgccagcgacaacgcgatctccctgcccgcgggcgcg
agcgtcggcaagaccctgaagaagtggaacgagtccccgctcaccgccgagaacaactac
gtcaacggcaggctgacggacctcatcgccgtccacaacgcggagatccccgcggagatc
ctccagtccggcgccgggtggacaccgaccctgcggaccgaggtcgactcgccgcgcgcg
gtaccgggcatcgtcgcgggcggcgcgggcgccggaaaggtctgctga
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