Streptomyces phaeolivaceus: F9278_16810
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Entry
F9278_16810 CDS
T07107
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sphv
Streptomyces phaeolivaceus
Pathway
sphv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F9278_16810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphv03019
]
F9278_16810
03009 Ribosome biogenesis [BR:
sphv03009
]
F9278_16810
Messenger RNA biogenesis [BR:
sphv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F9278_16810
Ribosome biogenesis [BR:
sphv03009
]
Eukaryotic type
Pre-60S particles
RNases
F9278_16810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QFQ97607
UniProt:
A0A5P8K4P8
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All DBs
Position
3585707..3586309
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVVRPPDSALETMPEVVR
AMHTASGLLDALPGGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRGFLSRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPH
PGPDSDTARTIAAKHVLPAG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gcgctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtgctcggcgaaggt
gtcgacatcgtcgtccgcccgccggactcggcactggagaccatgccggaggtggtgcgc
gccatgcacaccgcgtccggcctcctcgacgcactgcccggcggtacgacgctggccgac
gcggaggcgcaggtcctggcgtacgtacgggaacacgtgaaggaaccgggcaaggccccc
ctgtgcggcaactcggtgggcacggaccgcggcttcctgtcgcgggacatgccgaccctg
gaggactacctccactaccgcatcgtggacgtctcctcgatcaaggaactggcccgccgc
tggtacccgagggcgtacttcaacagccccgagaagaacggcaaccaccgggccctcgcc
gacatccgcgagtccatcgccgagctgcgctactaccgcgaggcgatcttcgtcccgcac
cccgggcccgactcggacacggcccgcacgatcgccgcgaagcacgtcctgcccgcgggg
tag
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