Streptomyces phaeolivaceus: F9278_24655
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Entry
F9278_24655 CDS
T07107
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sphv
Streptomyces phaeolivaceus
Pathway
sphv00040
Pentose and glucuronate interconversions
sphv01100
Metabolic pathways
sphv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
F9278_24655
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F9278_24655
Enzymes [BR:
sphv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
F9278_24655
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Motif
Pfam:
Pectate_lyase_4
UCR_Fe-S_N
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QFQ98824
UniProt:
A0A5P8K700
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Position
5225516..5226871
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AA seq
451 aa
AA seq
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MASASSRPSHRRSLRKRRTLVVSAAAVAAAVGVGAVVMNASATATVDLYHQVLPAKDGWA
ASGSGTTGGTKADAAHTFTVSTRAQLVKALGSATDTTPRIIKVKGTIDANTNDSGKKLTC
ADYASGTGYSLSAYLKAFAPSTYGKKAPKGTQETAREAAETKQKKNIVFKVPANTTVVGV
PGTKAGILGGSLQVQNVKNVIVRNLTFADTRDCFPQWDPTDGSSGEWNSNYDSVTLRGAT
NVWADHNTFTDAPTFDKTEATYYGRKYQVHDGALDITNGSDLVTVERNRFLNHDKTMLIG
SSDTDSTGKLRVTIHHNLWKGIVQRAPLARIGQIHLYNNVYDITTVNGYAPKYSLDSRAK
AQVVAERNVWKTPADAKVAKLLSGDGTGSVAGTGNLVNGKATDLVAAYNAANSKKLKKTV
NWTPPLTAGLQTAVTALRTDLSGTTGAGALS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtggcctctgcctcctcgcgcccctcccaccgccggtccctccgcaagcgtcggaccctc
gtggtctccgccgccgccgtggccgcggccgtcggcgtcggcgccgtcgtgatgaacgcc
agcgcgaccgcgaccgtggacctgtaccaccaggtgctgcccgccaaggacggctgggcg
gcgtccggttccggtacgaccggcgggacgaaggccgacgcggcgcacaccttcacggtg
tcgacccgggcgcagctggtgaaggcgctgggctccgcgaccgacaccacaccccggatc
atcaaggtcaagggcacgatcgacgccaacaccaatgactccggcaagaagctgacctgc
gcggactacgcctcaggcaccggctactcgctctccgcctacctcaaggcgttcgccccg
tcgacgtacggcaagaaggcgcccaagggcacccaggagaccgcccgcgaggccgccgag
accaagcagaagaagaacatcgtcttcaaggtgcccgccaacaccaccgtcgtgggcgtc
cccggcaccaaggcgggcatcctcggcggcagcctccaggtgcagaacgtcaagaacgtc
atcgtccgcaacctgaccttcgcggacacccgggactgcttcccgcagtgggaccccacc
gacggctcctcgggcgagtggaactccaactacgactccgtcacgctgcgcggcgcgacc
aacgtctgggcggaccacaacacgttcaccgacgcgccgaccttcgacaagaccgaggcg
acgtactacggccgcaagtaccaggtccacgacggcgcgctggacatcaccaacggctcc
gacctggtgaccgtcgagcgcaaccggttcctcaaccacgacaagacgatgctgatcggc
tccagcgacaccgactccaccggcaagctgcgcgtgacgatccaccacaacctgtggaag
ggcatcgtgcagcgggcgccgctggcccgcatcggccagatccacctctacaacaacgtc
tacgacatcaccacggtcaacggctacgcccccaagtacagcctcgactcccgcgccaag
gcccaggtcgtcgccgagcgcaacgtctggaagacccccgccgacgcgaaggtcgccaag
ctgctgagcggcgacggcaccggctcggtcgccggcaccggcaacctggtcaacggcaag
gccaccgatctcgtcgccgcgtacaacgccgcgaactcgaagaagctgaagaagacggtc
aattggaccccgcccctcaccgccggcctccagaccgcggtcaccgccctccgcaccgac
ctgtccggcacgacgggcgccggcgccctctcctga
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