Streptomyces phaeolivaceus: F9278_28035
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Entry
F9278_28035 CDS
T07107
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sphv
Streptomyces phaeolivaceus
Pathway
sphv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F9278_28035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphv03400
]
F9278_28035
Enzymes [BR:
sphv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F9278_28035
DNA repair and recombination proteins [BR:
sphv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F9278_28035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
OB_YrrC
AAA_11
HHH_5
AAA_22
PIF1
UvrD-helicase
AAA_12
SLFN-g3_helicase
T2SSE
UvrD_C
HHH_2
AAA_16
TraI_hel_assoc_N
Helicase_RecD
NPHP3_N
TRI-like_N
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QFQ99362
UniProt:
A0A5P8K962
LinkDB
All DBs
Position
5986676..5988997
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AA seq
773 aa
AA seq
DB search
MSDELDSNLSDAVEGVVEHLLHVSYDERTVLRLTSTADDDPSITVVGKALFGVRPGESVR
VSGRWTQHLRYGRQFIAERCDRRMPADERAIRMYLASGMIRGIGPTLAGAIVDRFRDQTL
KIIDAEAQRLLEVHNIGDIRLARITAAWQEQKSIAEIMVFLQGLNLTPALAVKIYTAYAD
TDDDPMHIVRHTPYRLCRDVRGIGFDKADKIALALGVPKHSDERLQAALTHELNLAAGQA
GHCHLPVRVLLFRTRTLLKDDDPATAEILDDVVLRHALKALCDHNEAIIETLPLPARDGS
GTLVDTEIAVLPRLHRDETQLAHHVRRLLSARSLLAEVAPWDDRLAGLTTTETSGLTEEQ
HHAILTALTSPVSILTGGPGCGKTHTLRTLVEIADEAHALVALAAPTGKAAKRLEETTGR
DAMTVHRLIRPPDGHTLFDHSSPLDSADLIVIDEASMLDTALARKLTAAIRDGCHLLLVG
DVDQLPSVGPGRVLRDLLDVEDVPRTRLTRVFRQHDDSAAIVHNAHRILRGALPEDDRKA
FWNRHVPDPDEVAQRVVDLVADLMPRHFGVLPTDIQVLCPGKKNIAGMTDLNLRLQLRLN
PPSDDKPQHYHDGIAFRLGDRVQQIRNNPHRGETGIFNGSSGTVTALDLEAHQLTVTFHD
AEQAAYPFAELDELIHAYALTVHRSQGSEYPYVIVPVLRETGDLLLQRNLLYTAVTRARQ
GVMIIGHAEAVERAIANNRTLRRNTALTHRITTVQPTVPAPRRNATTGQLAWD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatgaactggactcgaacctttccgatgcggtggagggagtagtcgagcaccta
ttgcatgtcagctacgacgagcgcacggtgctgcggttgaccagtacggcggacgacgat
ccgagcatcactgtggtcggaaaggcgctcttcggcgtgcggccaggggagagcgtgcgc
gtgagcggcagatggacacaacatctccgctatggccgtcaattcatcgccgagcgctgc
gatcgcaggatgcccgccgacgaacgggccatccggatgtatctcgcctcgggcatgatc
cggggtatcgggccgacgctcgctggagcgatcgtggaccggttccgtgaccagacgcta
aagatcattgacgccgaagcgcagcgcttgctggaagtccacaacatcggcgacatccgg
ctggcgcggatcaccgcagcgtggcaagaacaaaagtccatcgccgagatcatggtgttc
ctgcaggggctgaatctcactcccgcgctcgcggtaaagatctacaccgcatacgccgat
accgacgacgaccccatgcacatcgtccggcacactccctaccggctgtgccgcgatgtg
cggggcatcggcttcgacaaagccgacaagatcgcccttgccttgggcgttccgaagcac
agcgacgagcgtctgcaggccgcgctcacgcacgaactcaacctcgctgccggccaggca
ggacactgtcacctgcccgtacgggttctgcttttccggacccgcacgctgctgaaggac
gacgacccggcgaccgccgagatccttgacgacgtggtgttgcgccacgccttgaaagca
ctgtgcgaccacaacgaggcgatcatcgaaaccctgccgctgcccgcgagggacggcagc
ggcactctggtggacacggagatcgctgtactcccacgcctgcaccgcgacgagacccag
ctcgctcaccacgtacggcgcctgctcagcgcccggtccctgctcgccgaagtcgccccc
tgggacgatcggttggctgggttgaccaccaccgagacgtccgggctgactgaggaacaa
caccacgcgatcctcaccgccctcaccagccctgtctcaatcctcactggtggcccaggc
tgcgggaagacccacaccctgcgcacccttgtcgagatcgccgacgaagcccacgcgctc
gtggcgctcgcggcgcccacgggaaaggccgcgaagcgactggaagaaaccaccggccgg
gacgcgatgaccgtccaccgcctcatccgccccccggacggccacactctcttcgaccac
tccagccctctcgactccgccgatctcatcgttatcgacgaagcatccatgctggatacc
gccctcgcccgcaagctcaccgccgccatccgcgacggctgccacctgctgctggtcggc
gatgtcgaccaactgcccagcgtcggccccgggcgggtactgcgcgacctgctcgacgtg
gaggacgtccctcgcacgcggctgacccgagtcttccgccagcacgatgacagcgccgcg
atcgtccacaacgcccaccgaatcctccgcggcgctctgcccgaggacgaccggaaggct
ttctggaacaggcacgttcccgacccggatgaagtcgcccagcgcgtagtggacttggtg
gccgacctcatgccccgtcacttcggcgtgcttcccacggacatccaggtcctgtgcccc
ggcaagaagaacatcgccggaatgaccgacctcaacctgcgcctacaactccggctcaac
ccgccgtccgacgacaaaccccagcactaccacgacggcatcgcgttccgtctcggcgac
cgcgtccagcagatccgcaacaacccccaccgcggggagacgggcatcttcaacggcagc
agcggcactgtcaccgctctcgacctggaagcccaccagctcaccgtcacgttccacgat
gccgaacaggccgcctacccgttcgcggaactcgacgaactcatccacgcttacgcgctg
actgtccaccgctcacaaggcagcgagtacccgtacgtgatcgtcccggtcctcagagag
accggcgatctgctcctccagcggaacctgctgtacaccgctgtcactcgtgcccgccaa
ggagtcatgattatcggacatgccgaggcagtggagcgagcgattgccaacaatcgcacc
ctcaggcgcaacaccgccctgacccaccgcatcaccaccgttcagccgaccgtgccggca
ccacgacggaatgcgactaccggccaactcgcctgggactga
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