Streptomyces phaeolivaceus: F9278_30080
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Entry
F9278_30080 CDS
T07107
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sphv
Streptomyces phaeolivaceus
Pathway
sphv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9278_30080 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphv03019
]
F9278_30080 (recQ)
03400 DNA repair and recombination proteins [BR:
sphv03400
]
F9278_30080 (recQ)
Enzymes [BR:
sphv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F9278_30080 (recQ)
Messenger RNA biogenesis [BR:
sphv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F9278_30080 (recQ)
DNA repair and recombination proteins [BR:
sphv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F9278_30080 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
QFQ99698
UniProt:
A0A5P8KA68
LinkDB
All DBs
Position
6477577..6479628
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AA seq
683 aa
AA seq
DB search
MIGTGGTSVMADEGRTTGADSEALAVLHRVFGYDAFRGDQEAIIEHVVAGGDAVVLMPTG
GGKSLCYQIPSLVRPGTGIVVSPLIALMQDQVDALRALGVRAGFVNSTQDFDERRVVEAE
FLAGELDLLYLAPERLRLDATLDLLGRGKISVFAIDEAHCVSQWGHDFRPDYLSLSLLGQ
RWPDVPRIALTATATHATHREITERLAMPQARHFEASFDRPNIQYRIVPKADPKKQLLSF
LRQEHPGDAGIVYCLSRNSVERTAEFLSKNGVAAVPYHAGLDAGTRAAHQSRFLREDGLV
VVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQR
KMIQGSEGDEAFRRRAASHLDAMLALCETAQCRRGQLLQYFGQEPQAEGCGNCDTCLVPP
ETWDGTVASQKVLSAVVRLQRERGQKFGAVQIVDILLGRRTAKVIQFDHDQLSVFGIGEE
LAEGEWRGVVRQLLAQGILAVEGEYGTLVLTEESGAVLRRERDVPLRKEPKKPATTRSAS
GGGSGSSGSGRGDRKAKAAAVELSDDLIPVFEALRAWRAEQAREQGVPAYVIFHDATLRE
IVATAPASVAELGTISGIGEKKLATYGEGVLGVLTSLGGAPAAAPAPDGPRSPARETSAA
DAGPEDAFDWPDDEPEPEPEDWA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggacgggcgggacgagtgtgatggcggacgagggcaggacgaccggagcggac
agcgaggcgctggccgtgctccaccgggtcttcgggtacgacgccttccggggcgaccag
gaagcgatcatcgagcatgtggtcgcgggcggcgacgccgtcgtgctcatgccgaccggc
ggcggcaaatcgctgtgctaccagatcccgtccctggtcaggccgggtacgggcatcgtg
gtctccccgctgatcgcgctgatgcaggaccaggtggacgcgctgcgggcgctgggcgtg
cgcgccgggttcgtcaactccacacaggacttcgacgagcggcgcgtggtcgaggcggag
ttcctcgccggcgagctggacctgctctacctcgcacccgagcggctgcggctcgacgcc
accctggatctgctggggcgcggcaagatctcggtgttcgcgatcgacgaggcgcactgc
gtctcccagtgggggcacgacttccgcccggactacctctccctgtccctgctggggcag
cgctggccggacgtaccgcgcatcgcgctcacggccaccgccacccacgccacgcaccgc
gagatcaccgagcggctggccatgccgcaggcccggcacttcgaggccagcttcgaccgg
cccaacatccagtaccggatcgtgcccaaggccgatccgaagaagcagctcctgtccttc
ctgcgccaggagcaccccggcgacgcgggcatcgtctactgcctgtccaggaactccgtc
gagcgcacggccgaattcctgagcaagaacggcgtcgcggcggtcccgtaccacgcggga
ctcgacgcgggcacccgcgcggcacaccagtcccggttcctgcgcgaggacgggctcgtg
gtcgtcgccacgatcgccttcggcatgggcatcgacaagcccgacgtacggttcgtcgcc
cacctggacctgccgaagtcggtggagggctactaccaggagaccggccgcgccggccgc
gacgggctgccgtccacggcttggatggcgtacggcctgaacgacgtcatacagcagcgg
aagatgatccagggcagcgagggcgacgaggcgttccgccgccgggccgcctcccacctg
gacgcgatgctggcgctctgcgagaccgcccagtgccggcgcggtcagctcctgcagtac
ttcggccaggaaccccaggccgagggctgcggcaactgcgacacctgcctcgtaccgccg
gagacctgggacggcacggtcgcctcgcagaaggtgctctccgccgtggtgcggctgcag
cgggagcggggacagaagttcggcgccgtgcagatcgtcgacatcctgctggggcggcgg
accgcgaaggtcatccagttcgaccacgaccagctctccgtcttcggcatcggtgaggag
ctggccgagggcgaatggcggggcgtcgtaagacagttgctcgcacagggcatcctcgcg
gtcgagggcgagtacggcacgctcgtgctcaccgaggagagcggggcggtgctgcgccga
gagcgggacgtgccgctgcgcaaggagccgaagaagccggcgaccacgcggtcggcgtcc
ggcggcggatcgggatcctccggctccggccggggcgaccgcaaggccaaggcggcggcc
gtcgagctgtcggacgacctgatccccgtcttcgaggcgctccgcgcctggcgcgccgaa
caggcccgcgaacagggcgtccccgcgtacgtcatcttccacgacgccaccctccgcgag
atcgtggccaccgcgcccgcgtccgtcgccgaactcggcacgatcagcggaatcggcgag
aagaaactggcgacgtacggggagggcgtactgggggtgctgacttcgttgggcggcgcc
cctgcggcggcccccgcacccgacgggcccagaagcccggcccgcgagacgtccgccgcg
gacgcgggcccggaggacgccttcgactggccggacgacgagccggagccggagccggag
gactgggcgtag
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