Streptomyces phaeolivaceus: F9278_31190
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Entry
F9278_31190 CDS
T07107
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphv
Streptomyces phaeolivaceus
Pathway
sphv03420
Nucleotide excision repair
sphv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F9278_31190 (pcrA)
03430 Mismatch repair
F9278_31190 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphv03400
]
F9278_31190 (pcrA)
Enzymes [BR:
sphv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F9278_31190 (pcrA)
DNA repair and recombination proteins [BR:
sphv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F9278_31190 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
F9278_31190 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFQ99882
UniProt:
A0A5P8KAP2
LinkDB
All DBs
Position
6711547..6714072
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AA seq
841 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHAEEPPPPPEDDHVPEPLPDDLFGGKFDAPPDRDAYYRDGAP
RPAIDAAALLDGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLGERRVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQASDGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRVL
VGTSEHPVDVPPNEWDVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADEIDRLT
DAGDAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMASRSTNAVKR
FNTLMEDLRTVVDSGAGPATILEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQESGAAAGEGEGEGEGEAVATPAGLSAFLERVALVADSDQIPDEEEDGSGVITLMTLHT
AKGLEFPVVFLTGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSLRSAW
GQPSYNPPSRFLEEIPATHLEWKRTGASAPVSSGPAAGVVSSLSSSRSRSSASGASGFAT
RRGNEKPVVSLAVGDRVTHDQFGLGTVVGVGGAGANAEATIDFGDAKPKRLLLRYAPVEK
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagctttctggcggacctccaggccccccgcggccacgcg
gaggaacccccgccgccgcccgaggacgatcacgtaccggagccgcttccggacgatctg
ttcggcgggaagttcgacgcgccaccggaccgggacgcgtactaccgcgacggcgccccc
cgccccgcgatcgacgcggcggcgctcctggacgggctgaacgagaaccagcgcgcggcc
gtggtgcatgccgggtcccccctgctcatcgtcgccggcgccggctcgggcaagacccgg
gtgctcacccatcgcatcgcccatctgctgggcgagcggcgggtccatcccggccagatc
ctcgcgatcaccttcaccaacaaggccgccggtgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgccatgtgggtcatgaccttccacagcgcgtgcgtacggatc
ctgcgccgggagagcaagaagctcggcttcacctcctccttctccatctacgacgccgcc
gacagcaagcggctgatggcgctcgtctgccgtgatctggacctcgacccgaagcgcttc
ccgcccaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggcctccgacggcttcgagaagaccctcgcccaggcctacgcgatg
taccagtcccgcctccgcgaggcgaacgcgctggacttcgacgacctgatcatgacgacg
gtcaatctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcat
gtcctcgtcgacgagtaccaggacaccaaccatgcccagtacgccctggtcagagtgctg
gtcggcacctccgagcacccggtcgacgtcccgcccaacgagtgggacgtaccgcccgcc
gagctgtgcgtcgtgggtgacgccgaccagtcgatctacgccttccgcggtgcgaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacgcagacgattctgagcgcggccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaacgcgggcgcgggcgcccagatcaccggctat
gtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgactgacg
gacgcgggcgacgcgaaggccggagacgtcgccgtcttctaccggaccaacgcccagtcc
cgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctcgcctacctgcgcgttctcgccaac
ccggaggactccgtcccgctgcgccgcatcctcaacgtgcccaagcgcggcatcggggac
cgcgccgaggcgatgatcgacgccctctcgcagcgcgagaagatcagcttcccgcaggcc
ctgaagcgcgtcgacgaggcgtacggcatggcgtcccgctcgaccaacgccgtcaagcgg
ttcaacacgctgatggaggacctgcggaccgtcgtcgactccggcgcaggaccggcgacc
atcctggaggcggtcctcgaacgcaccggctatctcgccgagttgcaggcctccaccgac
ccccaggacgagacccgtatcgagaacctccaggaactcgccgccgtcgccctggagttc
gagcaggagtccggggccgcggcaggcgagggagagggcgagggcgagggcgaggccgtc
gcgacgcccgccgggctctccgccttcctggagcgggtcgccctcgtcgccgactccgac
cagatccccgacgaggaggaggacggctcgggcgtcatcacgctcatgaccctccacacc
gccaagggcctggagttcccggtcgtcttcctcaccggcatggaggacggcgtcttcccg
cacatgcgtgccctcggccagaccaaggagctggaggaggagcgccggctcgcgtacgtc
ggcatcacccgcgcacgggaacggctctacctcacccggtcctcgctacgcagcgcctgg
ggccagccctcgtacaacccgccgtcccgcttcctggaggagatcccggcgacgcatctg
gagtggaagcgcacgggtgcctccgcgccggtctcctcggggccggccgccggggtcgtg
tcctcgctgtcctcgtcccgctcccgttcctcggcctccggcgcgtccggcttcgcgacc
cgccgaggcaacgagaagccggtggtctcgctcgcggtgggcgaccgcgtcacccatgac
cagttcggcctcggcacggtcgtcggtgtcgggggcgcgggcgccaacgcggaggccacg
atcgacttcggtgacgccaagccgaagcggctgctgctgaggtacgcgccggtggagaag
ctgtag
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