KEGG   Streptomyces phaeolivaceus: F9278_35185
Entry
F9278_35185       CDS       T07107                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sphv  Streptomyces phaeolivaceus
Brite
KEGG Orthology (KO) [BR:sphv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphv03032]
    F9278_35185
   03036 Chromosome and associated proteins [BR:sphv03036]
    F9278_35185
   03400 DNA repair and recombination proteins [BR:sphv03400]
    F9278_35185
DNA replication proteins [BR:sphv03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F9278_35185
Chromosome and associated proteins [BR:sphv03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F9278_35185
DNA repair and recombination proteins [BR:sphv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F9278_35185
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: QFR00552
UniProt: A0A5P8KBN1
LinkDB
Position
7624496..7625149
AA seq 217 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGGASATVKK
AVAKKTTAKKVTARKTTAAAKKTTAAAKKTTAKKTTAKKATTKSAAAKKTAAKKTTAAAK
KTAAKKAPAKKATAKKAPAKKSTARKTTAKKTAARQA
NT seq 654 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgcggacaaggtcggcgggcgtcagcaggcc
gccgacgcggtcgacgccgttctggacgccatcgtccgcgcggtcgtcgccggcgaccgg
gtgtcggtcactggcttcggttcgttcgagaaggtcgaccggccggcccgttacgcccgc
aacccgcagacgggtgagcgggttcgggtcaagaagacctccgtgccccgtttccgcgcg
ggccagggtttcaaggacctggtgagcggctcgaagaagcttccccgcggtggcgaggtc
gcggtcaagaaggcgcccaagggcagcctgagcggtggggcttcggcgacggtcaagaag
gcggtggcgaagaagaccaccgcgaagaaggtgaccgcccgcaagaccaccgccgcggcc
aagaagacgacggccgccgcgaagaagaccacggcgaagaagacgaccgccaagaaggcc
acgaccaagtcggcggcggcgaagaagacggccgccaagaagaccacggcggcggcgaag
aagaccgcggcgaagaaggcgccggccaagaaggccaccgcgaagaaggcgccggccaag
aagtcgacggctcgcaagacgaccgcgaagaagacggccgcgcgtcaggcgtag

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