Streptomyces phaeolivaceus: F9278_36065
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Entry
F9278_36065 CDS
T07107
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sphv
Streptomyces phaeolivaceus
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphv03009
]
F9278_36065 (rimO)
Enzymes [BR:
sphv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F9278_36065 (rimO)
Ribosome biogenesis [BR:
sphv03009
]
Prokaryotic type
ribosomal protein modification factors
F9278_36065 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QFR00700
UniProt:
A0A5P8KDU0
LinkDB
All DBs
Position
7835370..7836851
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEQADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAQRQESAAGVALPGHAPVDLPEGLAPASGPRSPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLESLLPELADVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSF
QHSAPAVLRSMRRFGDTDRFLELLDTIRGKAPEAGVRSNFIVGFPGESEDDLAELERFLN
GARLDAIGVFGYSDEEGTEAATYENKLPEDVVAERLAHVSRLAEELVSQRAEERVGQTVR
VLVESVDGDEGAYGRGAHQAPETDGQVLFTSGEDLSVGLMVEAKVVGTEGVDLVAEVLPG
SLGSLVCTEEAAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggacgccgag
caagcggacgtcgcggtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtcgacgcgctcctggaggccaacgacctcaaggggcacggcagaacccaggccgtcgtg
gccgtcggctgcatggccgagcgatacggcaaggatctggccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactacgcggacatctccgaccgtctccagaccatcctg
aacggcggcatccacgcctcgcacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggcccagcgccaggagtccgcggccggggtcgcgcttccgggacacgcccccgtcgat
cttccggaaggtctcgctccggcttccgggccgcgctcaccgctgcgccgccggctggac
ggctcacccgtcgcctccgtgaagctcgcctccggctgcgaccgccgttgctcgttctgc
gccatcccctccttccgtggctccttcatctcgcgccggccctcggacgtgctgaacgag
acccgctggctggccgagcagggcgtcaaggaggtgatgctcgtctccgagaacaacacc
tcgtacggcaaggacctcggcgacatccggctcctggagtccctgctgcccgagctggcc
gatgtcgacggcatcgagcgggtccgcgtcagctacctccagcccgccgagatgcggccc
ggcctcatcgacgtgctcacctccacccccaaggtcgtgccctacttcgacctctccttc
cagcactccgccccggccgtgctgcgctcgatgcgccgcttcggggacaccgaccgcttc
ctggagcttctcgacaccatccgcggcaaggcccccgaggccggtgtgcggtccaacttc
atcgtgggcttccccggcgagagcgaggacgacctcgcggagctggagcgcttcctgaac
ggcgcgagactggacgccatcggcgtcttcgggtactccgacgaggagggcaccgaggcg
gccacgtacgagaacaagctgcccgaggacgtcgtcgccgagcgtctcgcacacgtctcg
cggctggccgaggagctggtctcgcagcgcgccgaggagcgcgtcggccagaccgtgcgc
gtgctggtcgagtcggtcgacggcgacgagggcgcgtacggccgcggtgcgcaccaggcg
cccgagacggacgggcaggtgctgttcacgagcggcgaggacttgagcgtcggccttatg
gtcgaggcgaaggtggtcggcacggaaggcgtcgacctggtggccgaggtgcttccgggt
tcgctcggctccctcgtgtgtactgaggaggcggccagatga
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