KEGG   Streptomyces phaeolivaceus: F9278_36415
Entry
F9278_36415       CDS       T07107                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sphv  Streptomyces phaeolivaceus
Brite
KEGG Orthology (KO) [BR:sphv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphv03400]
    F9278_36415
Enzymes [BR:sphv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F9278_36415
    5.6.2.6  RNA 3'-5' helicase
     F9278_36415
DNA repair and recombination proteins [BR:sphv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F9278_36415
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr DEAD Helicase_C ResIII DUF6406 AAA_25
Other DBs
NCBI-ProteinID: QFR00762
UniProt: A0A5P8KC92
LinkDB
Position
complement(7882640..7887400)
AA seq 1586 aa
MVSSADRALDGFSPATRGWFTGAFSAPTAAQAGAWLAIGEGADVLVVAPTGSGKTLAAFL
AALDQLTSTPPPADPRKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEVR
VGIRSGDTPPTERRALATRPPDILITTPESLFLMLTSAARDALTGVETVILDEVHAVAGT
KRGAHLALSLERLDELLPAPARRIGLSATVRPVDEVARYLSPHRRVEIVQPPSGKEFDLS
VVVPVEDLGELGGSPVAEGNEGAERPSIWPHVEERIADLVQAHRSTIVFANSRRLAERLC
NRLNEIAYERATGVPLDQHHAPAELMGGSGAAQGAPPVLARAHHGSVSKEQRALVEEDLK
AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY
RGDLVQSAVVTERMRSGSIESMRIPGNPLDVLAQQLVAMTSMDTWQFDDLLAAVRRAAPF
AALPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTITGRPGAQRLAVTSGGTIPDR
GLFGVFLAGSDPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG
VPGRLPFWKGDQLGRPLELGRAVGAFLREVGALSQEDARLRLLAAGLDAWAADNVLSYLT
EQREACGHVPDDRTIVVERFRDELGDWRIVVHSPFGAQVHAPWALALGAKLSERYGMEAQ
VMHADDGIVLRLPDADLMGLDLLDMEPMKAGTLLNTAADAEQAPVGAADVAFDKGEVDRI
VTDQVGGSALFASRFRECAARALLLPRRNPGKRTPLWQQRQRASQLLQVASEFGSFPIVL
EAVRECLQDVFDVPGLTELMGDIESRRVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSP
LAERRAAALSLDSRLLAELLGQAELRELLDAEVLTELERELRRLTEDRRVKDAEGVADLL
RLLGPLTDAELAERGAEPRWARDLAGTRRAIRVRIAGTDHWAAIEDAGRLRDALGTALPV
GVPEAFTEPVKDPLGDLLARYARTHGPFTSATAAARFGLGVAVTDGALHRLAANGRVVQG
EFHPAGIGQEWCDTTVLRRLRRRSLAALRHELEPVPPAALAQFLPQWQHVGGGHGLRGID
GLIRAIEQLQGASVPASALEKLVLPSRVAHYNPAMLDELTAAGEVVWAGAGALPGKDGWV
SLYLADSAPLLLPPAHPLEPTALHESILNTLSGGYGLFFRQIADQVRATAHPDATDPQLA
DAVWDLAWSGRLTNDTLTPMRSLLGSGRTAGSTAHRAKRTIPRGRYGSLTAAARPQSRTG
PPTVAGRWSLLPAHEPDATVRAHARARTLLDRHGVVTRGAVGAEGVEGGFSAVYRVLSVF
EESGQARRGYVVEGLGAAQFAMDGAVDRLRSVSHARDRDEPLPGPAADGFTDGPGTPRTP
WDGSPDHTTPTRSSTPSPRAVVLAAADPANAYGAALPWPDPPTEAGHKPGRKAGSLVVLV
DGELTLYMERGGKTLLAWPADPDARPQDDPRLRPAAEALSAAARAGSLGTVTVERVNGTA
ALTAPHGPLLEAAGFIATPRGLRIRA
NT seq 4761 nt   +upstreamnt  +downstreamnt
atggtcagctccgcagatcgagccctcgacggcttctcccccgcgacccgcggctggttc
acgggggctttctccgcgcccaccgcggcccaggccggggcgtggctggcgatcggcgag
ggcgcggacgtgctggtggtcgccccgaccggctccggcaagacgctggccgcgttcctc
gccgccctggaccagctgacgtcgaccccgcccccggccgacccgaggaagcgctgccgg
gtgctgtacgtgtcaccgctgaaggcgctcgcggtggacgtggagcggaacctgcgcagt
ccactgaccggtatccgtcaggagtccgtgcgtctggggctgcccgagcccgaggtcagg
gtgggcatccgctccggcgacaccccgcccaccgagcgccgcgccctggccacgcgcccg
cccgacatcctgatcaccacccccgagtcgctgttcctgatgctgacctcggccgcgcgc
gacgcgctcacgggcgtggagacggtgatcctggacgaggtgcacgccgtcgcgggcacc
aagcgcggcgctcatctcgccctctccctggagcggctcgacgagctgctgcccgcgccg
gcccgccggatcggtctgtccgccaccgtgcgccccgtggacgaggtcgcgcgctatctc
tccccgcaccgccgggtggagatcgtccagcccccgtccggcaaggagttcgacctctcc
gtcgtcgtgccggtggaggacctgggcgagctgggcggttccccggtcgccgagggcaac
gagggcgcggagcggccgtcgatctggccgcatgtcgaggagcggatcgccgacctcgtc
caggcccaccgctccacgatcgtgttcgccaactcccgccgcctcgcggagcggctgtgc
aaccggctcaacgagatcgcgtacgagcgggccaccggtgtgccgctggaccagcaccac
gccccggcggagctgatgggcggctcgggcgcggcccagggcgcgcccccggtcctcgcg
cgcgcccaccacggctcggtctccaaggaacagcgcgccctggtcgaggaggacctgaag
gcgggccggctgcctgccgtggtcgccacctccagtctcgaactgggcatcgacatgggc
gcggtggacctcgtcgtccaggtcgagtcgcctccctcggtcgcctcgggtctccagcgc
gtgggccgcgcgggacaccaggtgggcgcggtctccacgggcgtggtcttccccaagtac
cgcggcgacctggtccagtcggccgtggtcaccgagcggatgcgcagcggctcgatcgag
tccatgcggatccccggcaacccgctcgacgtgctggcgcagcagctcgtcgccatgacg
tcgatggacacctggcagttcgacgatctcctcgccgccgtccgccgcgccgcgccgttc
gccgcgctccccgagtccgcgttcacggccgtcctcgacatgctcgctggccgctatccg
tccgacgccttcgcggagttgcgcccgcgcgtggtgtgggaccgcgtcgcgggcacgatc
accggacggccgggcgcccagcgcctcgcggtcacctccgggggcacgatcccggaccgc
ggcctgttcggtgtcttcctcgcgggctccgaccccaagaagggcggcggccgggtcggc
gagctggacgaggagatggtgtacgagtcccgggtcggggacgtgttcaccctgggcacc
agctcctggcgcatcgaggacatcacccgtgaccgggtgctggtctcccccgcgccgggc
gtcccgggccgactgccgttctggaagggcgaccagctcggccgcccgctcgaactgggc
cgcgcggtcggcgcgttcctgcgcgaggtgggcgccctgtcccaggaggacgcccggctg
cgcctgctggccgccggtctggatgcctgggccgccgacaacgtcctgtcctacctgacc
gaacagcgcgaggcctgcggccatgtgcccgacgaccgcacgatcgtcgtcgagcgcttc
cgcgacgagctgggcgactggcggatcgtcgtccactcccccttcggcgcccaggtccac
gccccctgggccctcgccctcggcgcgaagctctccgagcggtacggcatggaagcccag
gtcatgcacgccgacgacggcatcgtgctgcgtctgcccgacgccgacctgatgggcctg
gacctgctcgacatggagcccatgaaggcgggcacactcctgaacacggcggccgacgcc
gagcaggccccggtcggcgcggcggacgtcgccttcgacaagggcgaggtcgaccggatc
gtcaccgaccaggtgggcggctcggccctgttcgcctcccgcttccgtgagtgcgccgcc
cgcgcgctcctgctgccccgtcgcaaccccggcaagcgcacccccctgtggcagcagcgc
cagcgcgcgtcccaactcctccaggtcgcgagcgagttcggctcgttcccgatcgtgctg
gaggcggtccgcgaatgcctccaggacgtcttcgacgtgccggggctcaccgaactgatg
ggcgacatcgagtcccgcagggttcgcctcgtcgaggtcaccaccccggagccctctccc
ttcgcccgctccctcctcttcggctacgtcgcccagttcctgtacgagggcgactccccg
ctcgccgagcgccgcgccgcggccctgtcgctggactcccggctgctggccgagctgctg
ggccaggcggagctgcgggagctgctggacgccgaggtgctcaccgagctggagcgtgag
ctgcgccggctcaccgaggaccgccgtgtcaaggacgccgagggcgtcgcggacctcctc
cggctcctcggccccctcacggacgccgagctggccgagcgcggcgccgagccgcggtgg
gcgcgggacctcgccgggacccgtcgcgccatccgggtccggatcgccggcaccgaccac
tgggcggcgatcgaggacgcgggccgcctgcgcgacgcgctcggcaccgccctgcccgtg
ggcgtcccggaggccttcaccgagccggtcaaggaccccctcggcgacctcctcgcccgg
tacgcccgcacccacggcccgttcacctcggccacggccgccgcccgcttcggcctcggc
gtggccgtcacggacggcgccctccatcgcctggcggcgaacggccgtgtcgtacagggc
gagttccatccggcgggcatcggccaggagtggtgcgacaccaccgtgctgcgccggctg
cgccgccgttccctggctgctctgcggcatgagctggagccggtgccgccggccgcgctc
gcccagttcctgccgcagtggcagcacgtcggcggcggccacgggctgcgcggcatcgac
ggactgatccgcgcgatcgagcagttgcagggagcgtcggtccccgcctccgccctggag
aagctggtcctgccgtcccgggtcgcccactacaacccggcgatgctcgacgaactcacc
gcggccggcgaggtcgtctgggcgggcgccggggccctccccggcaaggacggctgggtc
tccctgtacctggcggactcggccccgctcctcctgccacccgcgcaccccctggagccg
accgcgctccacgagtcgatcctcaacaccctctccgggggctacggcctcttcttccgc
cagatcgccgaccaggtccgcgccaccgcccacccggacgccaccgatccccaactggcc
gacgccgtctgggacctggcctggtcaggccgcctcaccaacgacaccctcaccccgatg
cgctccctcctgggctcgggccgcaccgcgggctccaccgcccaccgcgccaagcgcacg
atcccgcgcggccggtacggctccctgacggccgccgcccgcccccagtcccgtacgggc
ccgcccacggtcgccggacgctggtccctcctgcccgcccacgagcccgacgccacggtc
cgcgcccatgcccgtgcccgcaccctcctcgaccggcacggcgtcgtgacccgcggcgcg
gtgggcgccgagggggtcgagggcggcttctccgcggtctaccgcgtcctgtccgtcttc
gaggagagcggtcaggcccgccgcggctatgtcgtcgagggcctgggcgccgcccagttc
gcgatggacggcgccgtggaccgcctccgctcggtgtcccacgcccgcgaccgcgacgaa
cccctgcccggccccgccgcggacggcttcacggacggccccggcaccccccggaccccc
tgggacggctcccccgaccacaccacccccacccgctcctccaccccctccccccgagcc
gtggtcctggccgccgccgaccccgcgaacgcctacggcgccgccctcccctggcccgat
ccgcccaccgaggccggacacaaaccgggccgcaaggcgggctccctggtcgtcctggtc
gacggcgagctgaccctctacatggagcgaggcggcaagaccctgctcgcctggcccgcc
gaccccgacgcccgcccccaggacgacccccgcctccgccccgccgccgaagccctctcc
gcggcggcccgcgcgggctccctcggcacggtcacagtggaacgcgtgaacggcaccgcg
gccctcaccgccccccacggccctctcctggaagcagcgggcttcatcgcgaccccccgc
ggcctccgcatccgagcatga

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