Streptomyces phaeolivaceus: F9278_37640
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Entry
F9278_37640 CDS
T07107
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sphv
Streptomyces phaeolivaceus
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphv03016
]
F9278_37640
Enzymes [BR:
sphv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F9278_37640
Transfer RNA biogenesis [BR:
sphv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F9278_37640
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QFR03064
UniProt:
A0A5P8KI67
LinkDB
All DBs
Position
complement(8214690..8215889)
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AA seq
399 aa
AA seq
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MLEPRDGIPAVIADESSLAEVIAAFAAGSGPVAVDAERASGYRYGQRAYLVQLRREGAGT
ALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIDMVPTRIFDTELAGRLAGFPRV
GLGAMVEGVLGYVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWARQEFDAIATAPPAEPRKDPWRRTSGMHKVRRRRQMAVVREMWEARDRIAQRRDVSPG
KVLSDAAIVEASLALPVNAHALAALNGFGHRMGRRQLEQWQAAVDRARALPDSALPAHGQ
PVTGPPPPKAWADKDPAAAARLSAARAGVSALAEQLAMPQENLITPDTVRRLCWEPPVTA
DAESISAALAGYGARAWQVELVTPVLVGAMGAVAKVKGA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagccacgggacggcattccggccgtgatcgccgacgagtcctcgctcgccgag
gtgatcgccgcgttcgccgccggctccggccccgtcgccgtggacgccgaacgcgcgtcc
ggttaccgctacggtcagcgcgcctatctggtgcagctgcgccgcgagggcgcgggcacc
gcgctcatcgaccccgtcgcctgccccgacctctccggcctcggtgaggcgctctccggc
gtcgagtgggtcctccacgcggccacccaggatctgccctgtctgcgcgagatagacatg
gtgccgacacggatcttcgacaccgaactggccgggcgcctcgccggattcccccgggtc
ggcctcggcgcgatggtggagggcgtcctcggctacgtcctggagaagggccactccgcg
gtcgactggtccacccgcccgctgcccgagccctggctgcggtacgcggcgctcgacgtg
gagctcctcgtggacctgcgggacgccctggagaaggagctggaccggcaggggaagctg
gagtgggcgcggcaggagttcgacgcgatcgcgaccgcgccgcccgccgaaccgcgcaag
gacccgtggcggcgtacgtccgggatgcacaaggtgcggcgccgtcggcagatggccgtc
gtacgggagatgtgggaggcccgggaccgaatcgcccagcggcgggacgtgtcgccgggc
aaggtgctgagcgacgcggcgatcgtggaggcgtccttggcgctgccggtcaacgcgcac
gcgctggccgcgctgaacgggttcgggcatcggatggggcggcggcagctggagcagtgg
caggcggcggtggaccgggccagggccctgccggactcggcgctgccggcgcatgggcag
ccggtgacggggccgccgccgccgaaggcgtgggccgacaaggatccggccgcggcggcg
cggttgtcggcggcgcgggcgggggtgtccgcgctggccgagcagctcgcgatgcctcag
gagaacctgatcacccccgatacggtgcggcggttgtgctgggagccgccggtcacggct
gacgccgagtcgatctctgcggcgttggcggggtatggggctcgggcttggcaggtggag
ttggtgacgccggtgttggtgggggcgatgggggcggtggcgaaggtgaagggtgcctag
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