Streptomyces phaeolivaceus: F9278_38450
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Entry
F9278_38450 CDS
T07107
Name
(GenBank) rhamnogalacturonase B precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sphv
Streptomyces phaeolivaceus
Brite
KEGG Orthology (KO) [BR:
sphv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
F9278_38450
Enzymes [BR:
sphv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
F9278_38450
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF4397
Motif
Other DBs
NCBI-ProteinID:
QFR01098
UniProt:
A0A5P8KEQ0
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All DBs
Position
complement(8401369..8403072)
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AA seq
567 aa
AA seq
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MSESTDRPATTPRLGRRGFVVGTAATAAGVTGAALAGPLAGTARAAAFGYTDDGTHYVID
TGANLVFKVRKSNGDLASLVYRGTEYQGYGGMNSHIESGLGSSTVTITQSGSTILVSVTY
GTLRHYYAARSGENNVYLWTNKADTSVSATRFILRVKAGLFLNDEPDSYTYAPTTIEASD
VFAKSNGQTRSKHYSKLRVIDYNYVGWTTGSVGLYVVRSNHEKASGGPFYRSLLRHQSAD
GGGLYEILYYGQNQTEEQRFGLQGPYVIAFTDGGAPSSALFPGTLTTSWADSLGLSGYVS
ASGRGRVAGVGITGRNTAYAYTVGLANSAAQYWGSARASDGNYSVPGVLPGTYTLTVFKG
ELAVYTTSVTVTAGATTTLNSIAIPSSNDPSNAGAIWRINDWNGTPSGFKNADLMTYAHP
SDVRAAAWTGNVVIGSGTETSAFPCYLWKDVNSGLLVYFRLTAAQAAAAHTLRIGVTTAY
ANGRPQVVVNDAWTSAIPSPPTQPNTRSLTNGSYRGNNHTFTYSVPASAWLTDTSQYNVL
RINVVSGSGSTSYLSAGTAIDTIDLLS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatccaccgacagacccgccacgacaccccgtctgggccgccgcggcttcgtc
gtcggcaccgccgccacggctgccggagtcaccggagccgcgctcgccgggccgctggcc
ggtaccgcccgcgccgcggccttcggctacaccgacgacggcacccactacgtcatcgac
accggcgcgaacctggtgttcaaggtcaggaagagcaacggcgacctggcctcgctcgtc
taccggggcacggagtaccagggctacggcggcatgaactcgcacatcgagtccggcctc
ggcagctccacggtcaccatcacgcagtccggctcgacgatcctcgtctccgtcacctac
ggcacactgaggcactactacgcggcccgcagcggcgagaacaacgtctacctgtggacc
aacaaggccgacacctcggtctcggcgacccggttcatcctgcgcgtgaaggcgggcctg
ttcctcaacgacgagcccgattcctacacttacgcccccaccaccatcgaggcctcggac
gtcttcgccaagtccaacggccagacccgctcgaagcactactcgaagctgcgggtgatc
gactacaactacgtcggctggaccacgggcagcgtcggtctgtacgtcgtccgcagcaac
cacgagaaggcctccggcggcccgttctaccgctccctgctgcgccaccagagcgcggac
ggcggcggcctctacgagatcctgtactacggccagaaccagaccgaggagcagcggttc
ggcctccagggcccgtacgtcatcgccttcacggacggcggggcgccctcctcggcgctg
ttcccgggcacgctgaccacctcgtgggcggactcgctcggcctgtccgggtacgtctcg
gcgagcggccggggccgggtcgcgggcgtcggcatcaccggccgcaacacggcgtacgcg
tacacggtgggcctcgccaactcggcggcgcagtactggggttcggcgcgggcctcggac
ggcaactactccgtccccggggtgctgccggggacgtacacgctcacggtgttcaagggt
gagctggcggtgtacaccacctcggtgacggtcacggcgggcgcgacgacgacgctgaac
tcgatcgcgatcccgtcctcgaacgacccgtcgaacgcgggcgcgatctggcggatcaac
gactggaacggcacgcccagcggtttcaagaacgccgacctgatgacgtacgcgcatccg
tcggacgtccgggccgccgcctggaccggcaatgtggtgatcggcagcggcaccgagacc
tcggcgttcccctgctacctctggaaggacgtgaacagcggtctcctcgtctacttccgg
ctgaccgccgcgcaggccgccgccgcgcacaccctgcgcatcggggtgacgacggcctac
gccaacggccggccgcaggtcgtcgtcaacgacgcctggacctcggcgatcccctccccg
cccacccagccgaacacacgctcgctgacgaacgggtcctaccggggcaacaaccacacg
ttcacctacagcgtcccggcgtccgcctggctgacggacacgagtcagtacaacgtgctg
cggatcaacgtggtgagcgggtcggggtcgacctcctatctcagcgcgggcacggcgatc
gacacgatcgacctgctgagctga
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