Streptomyces phaeoluteigriseus: NFX46_00445
Help
Entry
NFX46_00445 CDS
T08568
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sphw
Streptomyces phaeoluteigriseus
Pathway
sphw00040
Pentose and glucuronate interconversions
sphw01100
Metabolic pathways
sphw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NFX46_00445
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFX46_00445
Enzymes [BR:
sphw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NFX46_00445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
USQ82371
LinkDB
All DBs
Position
95780..97123
Genome browser
AA seq
447 aa
AA seq
DB search
MAAPSHRRSLRSRRTLVVTAAVVAAGVGAGVVVMNASAGTVDLYHQTLAAKDGWASSGTG
TTGGTKADAAHTFTVSTRAQLVKALGSATDTTPRIIKVKGTIDANTDDAGKKLTCADYAA
GTGYSLAAYLKAYDPATYGRSKLPSGTQETARAAAQSKQAKNIVFRVPANTTIVGVPGTG
AGLTGAMLQVQNVDNVIVRNMTFAATEDCFPQWDPTDGDDGNWNSNYDSVTLRGATHVWA
DHNTFTDAPHLDSANPKYYGREYQIHDGSLDITKGSDLVTVSHNQFTNHDKTMLIGSSDT
DSVGKLRVSIHHNVWKGIIQRAPLARIGQIHIYNNYYDVTPLNGYATQYSINSRAKAQVV
AENNYWKLPSGAKAAKLLSGDGTGSVKGSGNLVNGTTTDLVAAYNAASSKDLKTTVNWTP
TLTTGLETSAKNLPTSLATTTGAGVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggcagctccctcccaccgtcggtccctccgctcgcgccgcaccctcgtcgtcaccgcc
gccgtcgtggccgcgggtgtcggtgccggtgtcgtcgtgatgaacgccagcgccgggacc
gtcgacctgtaccaccagacgctcgccgccaaggacggctgggcgtcctccggtacgggc
accaccggtggcacgaaggccgacgccgctcacaccttcaccgtctccacccgcgcccag
ctcgtgaaggcgctcggttccgcgaccgacaccacgccccggatcatcaaggtcaagggc
accatcgacgccaacaccgacgacgcgggcaagaagctgacctgcgccgactacgcggcc
ggcaccggctactcgctggcggcctacctcaaggcctacgacccggccacctacggccgc
tccaagctgccgtccggcacgcaggagacggcgcgcgccgccgcacagtccaagcaggcc
aagaacatcgtcttcagggtgcccgccaacacgacgatcgtgggggtccccgggacgggc
gcgggcctcaccggagccatgctccaggtgcagaacgtggacaacgtcatcgtccgcaac
atgaccttcgccgccaccgaggactgcttcccgcagtgggacccgaccgacggtgacgac
ggcaactggaactccaactacgactcggtcaccctgcgcggcgcgacccacgtgtgggcg
gaccacaacacgttcaccgacgcgccccacctggacagtgccaacccgaagtactacggc
cgcgagtaccagatccacgacggctccctcgacatcaccaagggctccgacctggtgacc
gtctcgcacaaccagttcaccaaccacgacaagacgatgctgatcggcagcagcgacacc
gacagcgtcggcaagctgcgcgtctccatccaccacaacgtgtggaagggcatcatccag
cgcgccccgctggcccgcatcggccagatccacatctacaacaactactacgacgtcacg
cccctcaacggctacgcgacgcagtacagcatcaactcccgcgccaaggcccaggtcgtc
gcggagaacaactactggaagctcccgtccggcgcgaaggccgccaagctcctcagcggc
gacggcaccggctcggtcaagggctccggcaacctggtcaacggcacgacgaccgacctc
gtcgccgcctacaacgccgcttcctccaaggacctgaagaccacggtcaactggaccccg
accctcacgacgggcctggagacctcggcgaagaacctgccgacgtcgctggccacgacg
acgggggcgggcgtgctcaagtag
DBGET
integrated database retrieval system
