Streptomyces phaeoluteigriseus: NFX46_02855
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Entry
NFX46_02855 CDS
T08568
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sphw
Streptomyces phaeoluteigriseus
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphw03016
]
NFX46_02855
Enzymes [BR:
sphw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
NFX46_02855
Transfer RNA biogenesis [BR:
sphw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
NFX46_02855
Prokaryotic type
tRNA splicing ligases
NFX46_02855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
USQ82803
UniProt:
A0ABY4Z2H3
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All DBs
Position
620844..622037
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AA seq
397 aa
AA seq
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MSYVEMPGAKVPIRMWADPATVEDGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDSPVEPG
RFHGLATGGWDGFWGRFDGIAEAVKFRAERAAKQMGTLGSGNHYIELLLDAEGSVWLTLH
SGSRNIGKELAEFHIGVAQKLPHNQGLIDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
TIMMALLKDVVGKEFKKAKPTFEQEISCHHNYVAEERYEGMDLLVTRKGAIRAGSGEYGI
IPGSMGTSSYIVKGLGNEKAFNSASHGAGRRMSRSAAKRRFTTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVMDQQRDLVQVVAKLKQFICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggttccgatccgcatgtgggccgaccccgcg
acggtcgaggacggcgcgctccagcagctgcgtaacgtcgccaccctgccgtggatcaag
ggcctggccgtcatgcccgacgtccactacggcaagggggcgacggtcggttcggtcatc
gcgatgcagggcgcggtgtgcccggcggcggtcggggtcgacatcggctgcggaatgtcc
gcggtcaagacctccctcacggcgaacgacctgccgggggacctgtcccgactccgctcg
aagatcgagcaggcgattccggtcgggcgggggatgcacgacagccccgtcgagccgggg
cggttccatgggctggccaccggcgggtgggacggcttctgggggcggttcgacgggatt
gcggaggcggtgaagttccgtgcggagcgggccgcgaagcagatggggacgctcggcagc
gggaatcactacatcgagctgctgctcgatgccgagggttcggtgtggctcacgctgcac
tccggctcccggaacatcggcaaggaactcgccgagttccacatcggcgtggctcagaag
ctcccgcacaaccagggcctgatcgaccgcgatctcgccgtcttcgtcgcggacaccccg
cagatggcggcgtaccgcaatgacctgttctgggcgcaggagtacgcgaagtacaaccgc
acgatcatgatggcgctcctgaaggacgtggtcggcaaggagttcaagaaggcgaagccg
accttcgagcaggagatctcgtgccaccacaattacgtggctgaggaacggtacgagggc
atggacctgctggtcacgcggaagggcgcgatccgggcgggctccggtgagtacgggatc
attcccggttcgatgggcaccagctcgtacatcgtgaaggggctcgggaacgagaaggcc
ttcaactcggcctcgcacggggcgggtcggcggatgagccggagcgcggccaagcgtcgc
ttcacgacgaaggacctggaggagcagacgcggggtgtggagtgccgcaaggactccggc
gtcgtggacgagatcccgggcgcctacaagccgatcgagcaggtcatggaccagcagcgg
gaccttgtccaggtagtggcgaagctgaagcagttcatctgcgtgaagggctga
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