Streptomyces phaeoluteigriseus: NFX46_03260
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Entry
NFX46_03260 CDS
T08568
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sphw
Streptomyces phaeoluteigriseus
Pathway
sphw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFX46_03260 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphw03019
]
NFX46_03260 (recQ)
03400 DNA repair and recombination proteins [BR:
sphw03400
]
NFX46_03260 (recQ)
Enzymes [BR:
sphw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NFX46_03260 (recQ)
Messenger RNA biogenesis [BR:
sphw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NFX46_03260 (recQ)
DNA repair and recombination proteins [BR:
sphw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NFX46_03260 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Tuberculin
Motif
Other DBs
NCBI-ProteinID:
USQ89407
LinkDB
All DBs
Position
700317..702371
Genome browser
AA seq
684 aa
AA seq
DB search
MRGTGGIREMPATTEMPGTESEALATLHRVFGYEAFRGEQGEVIEHVVAGGDAVVLMPTG
GGKSLCYQIPSLVRPGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRTVEAE
FLAGELDLLYLAPERLRLDTTLNLLSRGKIAVFAIDEAHCVSQWGHDFRPDYLALSLLGE
RWPDVPRIALTATATHATHQEITQRLRMPTARHFVASFDRPNIQYRIVPKADPKKQLLSF
LREEHAGDAGIVYCLSRNSVDKTAEFLSRNGIEAVPYHAGLDAGTRAAHQSRFLREEGLV
VCATIAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRGGRDGLPSTAWMAYGLNDVIQQR
KMIQSSEGDEAFRRRAAAHLESMLALCETVQCRRGQLLAYFGQEPDPKGCGNCDTCLVPP
ETWDGTVAAQKVLSTVVRLQRERGQKFGAVQIVDILMGKRSAKVIQFDHDQLSVFGIGDD
LSEGEWRGVIRQLLAQGLLAVEGDYGTLVLTDSSGEVLRREREVPLRKEPKKPVTARTSG
SSSGRGRAKAAAVELPEALLPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATEWPTS
VRQLGGISGVGEKKLATYGEGVIGVLASLGEAPDTAPVAAADSGTGPGTAQGSAPAAGGV
PSGDAGSDDYWPEMDAEPEPEDWI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggacgggcgggatcagggagatgccagcaaccaccgagatgccgggcacggag
agcgaggcactggccacgctccaccgggtcttcggttacgaggccttccggggtgagcag
ggcgaggtcatcgagcatgtcgtggccggcggggacgcggtcgtcctcatgccgaccggc
ggcggcaagtcgctgtgctaccagatcccctcccttgtcagaccaggtacgggcgtcgtc
gtatcgccgctgatcgcgctgatgcaggaccaggtggacgcccttcgggcactgggcgtg
cgtgccgggttcatgaactccacgcaggacttcgacgagcggcgcacggtcgaggccgag
ttcctggccggcgagctggacctgctgtacctggcgccggagcggctgcgcctggacacc
acgctgaacctgctgtcgcgcggcaagatcgcggtcttcgccatcgacgaagcccactgc
gtgtcccagtgggggcacgacttccgccccgactacctcgccctctccctgctgggcgag
cgctggcccgacgtcccgcggatcgcgctcacggccacggccacccacgcgacgcaccag
gagatcacgcagcggctgcgcatgccgacggcccggcacttcgtggcgagcttcgaccgg
cccaacatccagtaccggatcgtgccgaaggcggaccccaagaagcagctgctgagcttc
ctgcgcgaggagcacgcgggcgacgcgggcatcgtctactgcctctcgcgcaactccgtg
gacaagaccgccgagttcctctcccgcaacggcatcgaggccgtgccctaccacgcgggc
ctggacgcgggcacgcgcgcggcgcaccagtcgcgtttcctgcgggaggaaggcctggtc
gtctgcgcgaccatcgccttcggcatgggcatcgacaagccggacgtgcggttcgtcgcc
cacctcgacctgcccaagtcgatcgagggctactaccaggagacgggccgtgggggccgt
gacggactgccctcgacggcctggatggcctatggcctgaacgacgtcatacagcagcgc
aagatgatccagtcgagcgagggcgacgaggcgttccggcgccgggccgccgcccacctc
gagtcgatgctggcgctgtgcgagacggtccagtgccgccgtggacagctcctggcctac
ttcggccaggaaccggacccgaagggctgcggcaactgcgacacctgtctcgtacctccg
gagacctgggacggcacggtcgcggcacagaaggtgctgtcgacggtggtgcggttgcag
cgggagcgcggccagaagttcggcgcggtgcagatcgtcgacatcctgatgggcaagcgc
tcggccaaggtgatccagttcgaccacgaccagttgtcggtgttcggcatcggcgatgat
ctgtccgagggcgaatggcgcggcgtcatccgccagttgctggctcaagggctcctcgcc
gtcgagggggactacggcacgctggtgctgacggactccagcggggaggtgctgcggcgc
gagcgggaggtgccgctgcgcaaggagccgaagaagccggtgacggcgaggacttcgggg
tcctcctccggcaggggcagggcgaaggccgccgcggtcgaactgcccgaggcactgctg
cccgccttcgaggccctgcgcgcctggcgtgccgaacaggcacgggaacagggcgttccg
gcgtacgtcatcttccacgacgccacgctgcgggagatcgccacggagtggccgacgtcc
gtgcggcaactgggcgggatcagcggagtcggcgagaagaagctggcgacgtacggggag
ggagtgatcggcgtgctggcgtcgctgggcgaggccccggacacggctcccgtcgccgct
gctgactccgggacgggaccggggacggctcagggttccgctcctgccgccggtggggtg
ccctccggggacgccgggtccgacgactactggcccgagatggacgcggagccggaaccg
gaggactggatatag
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