Streptomyces phaeoluteigriseus: NFX46_10220
Help
Entry
NFX46_10220 CDS
T08568
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sphw
Streptomyces phaeoluteigriseus
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NFX46_10220
Enzymes [BR:
sphw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
NFX46_10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF4397
PEGA
Motif
Other DBs
NCBI-ProteinID:
USQ84139
LinkDB
All DBs
Position
complement(2277966..2279648)
Genome browser
AA seq
560 aa
AA seq
DB search
MSGSESQRPVRRRTFVLGAAAAAGTAALAGPLAVPASAAAFGYTDDGSNYVVDTGADLVF
KVSKTNGDLTSLVHRGVEYQGYGGMNSHIESGLGTSTVSVKQSGTTILVSVAYGTLKHYY
AARSGENNVYLWTHKADTSVSATRYILRVRKGLFLNDQPDSYTYTTSTIEASDVFAKSDG
QTRSKHYSKLRVMDYDHIGWSAGGVGLWIVRSNHEKASGGPFYRSLLRHQSADGGGLYEI
LHYGQNQTEDQRFGLQGPYVIAFTDGGAPSSSLFPGTLTTPWADSLGIAGYVGAGGRGRV
AGVGITGRNTAYPYTVGLANPAAQHWGSARASDGHYSIGGVLPGTYTLTVYKSELAVYST
QVTVSAGSTTSLNSIAIPSTNDPGNASAIWRINEWTGSPAGFKNADLMTYAHPSDVRAAA
WSGNVVIGSGSETSAFPCYIWKDVNSGLLVHFRLTAAQAAAAHTLRIGVTTAYANGRPQV
VVNDTWTSAVPSPPTQPNTRSLTNGSYRGNNHTFTYSIPASAWQTDTSRYNVLKINVVSG
SGTTGFLSAGTAFDAVDLLA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatccgagagccagcgcccggtccgacgccgcaccttcgtcctcggcgccgcg
gccgccgccggcaccgccgcgctcgccggtcccctcgccgtccccgcgtccgccgctgcc
ttcggctacaccgatgacggctcgaactacgtcgtcgacaccggagccgacctcgtcttc
aaggtcagcaagaccaacggcgacctcacctcgctcgtccaccgcggcgtggagtaccag
ggctacggcggcatgaactcgcacatcgagtccggcctcggcacctccacggtctccgtc
aagcagtccggtacgacgatcctggtctccgtcgcgtacggcacgctgaagcactactac
gccgcccgcagcggcgagaacaacgtctacctgtggacccacaaggccgacacgtccgtc
tcggcgacccgttacatcctgcgcgtgcggaagggcctgttcctcaacgaccagcccgac
tcctacacgtacaccaccagcaccatcgaggcatcggacgtgttcgcgaagtccgacggc
cagacccgctccaagcactactcgaagctgcgggtcatggactacgaccacatcggctgg
agcgccggcggcgtcggcctgtggatcgtgcgcagcaaccacgagaaggcttccggcggc
cccttctaccgctccctcctgcgccaccagagcgcggacggcggcggcctgtacgagatc
ctccactacggccagaaccagaccgaggaccagcgcttcggcctccaggggccgtacgtc
atcgccttcacggacggcggcgccccctcctcgtccctcttcccgggcacgctgaccacg
ccgtgggcggactcgctggggatcgccggatacgtcggcgccggcggccggggccgggtg
gcgggcgtcggcatcacggggcggaacacggcgtacccgtacacggtggggctcgccaac
ccggctgcccagcactggggttcggcgcgggcgtcggacggtcactactcgatcggcggg
gtgctgccggggacgtacacactcaccgtctacaagagcgagctggctgtatacagcaca
caggtgaccgtgtccgccgggtcgacgaccagcctcaactccatcgcgatcccctccacc
aacgacccgggcaacgcgagcgccatctggcggatcaacgagtggaccggctcacccgcc
ggcttcaagaacgccgacctgatgacgtacgcgcacccctccgacgtccgggccgcagcc
tggtccggcaacgtggtcatcggcagcggcagcgagacctccgccttcccctgctacatc
tggaaggacgtcaacagcggtctgctggtccacttccggctcaccgcggcccaggccgcc
gccgcgcacaccctgcgcatcggcgtgacgacggcctacgccaacggccgcccgcaggtc
gtcgtcaacgacacctggacctcggccgtcccctccccgcccacccagccgaacacgcgg
tcactgaccaacgggtcctaccggggcaacaaccacaccttcacctacagcatcccggcg
agcgcctggcagacggacaccagccggtacaacgtgctgaagatcaacgtggtgagcggt
tcggggacgaccgggttcctcagcgcgggaaccgctttcgacgccgtcgacctgcttgcc
tga
DBGET
integrated database retrieval system
