Streptomyces phaeoluteigriseus: NFX46_13635
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Entry
NFX46_13635 CDS
T08568
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sphw
Streptomyces phaeoluteigriseus
Pathway
sphw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NFX46_13635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphw03400
]
NFX46_13635
Enzymes [BR:
sphw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NFX46_13635
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NFX46_13635
DNA repair and recombination proteins [BR:
sphw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NFX46_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_RRN7
Zn_ribbon_8
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
USQ84740
LinkDB
All DBs
Position
3075711..3076574
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AA seq
287 aa
AA seq
DB search
MPELPEVEALKDFLTEHLVGHEIVRVLPVAISVLKTYDPPLAAVEGQAVTAVRRHGKFLD
LETAGGLHLISHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGEGFDLTEAGTQKRL
AVYLVRDPGEVPGVARLGPDPLAADFDEERFAALLSGERRQLKGALRDQSLIAGVGNAYS
DEILHAARMSPFKLAASLTPEETRTLYEALRSTLTEAVERSRGVAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTVREVSFSDSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtcgaagcgctcaaggacttcctcaccgagcacctggtcggc
cacgagatcgtgcgggtcctgcccgtcgcgatcagtgtgctgaagacgtacgacccgccc
ctggccgccgtcgagggccaggcggtcaccgcggtgcgccggcacggcaagttcctggac
ctggagaccgccggcggcctccacctcatcagccacctggcccgcgcgggctggctgcac
tggaaggaccgcctccccgacggtccgccccggcccggcaaggggccgctggccctgcgc
gtcgccctggagaccggcgagggtttcgacctcaccgaggccggcacccagaaacgcctc
gccgtgtacctcgtgcgcgacccgggggaggtgccgggagtggcccggctgggccccgac
ccgctggccgccgacttcgacgaggagcgcttcgccgccctgctgtccggcgagcgacgg
cagctcaagggcgcgctgcgcgaccagtccctgatcgccggcgtcggcaacgcctacagc
gacgagatcctgcacgcggcgcggatgtcccccttcaaactcgcggcctccctcaccccc
gaggagacccgcaccctctacgaggccctgcgcagcaccctcacggaggcggtggaacgc
tcgcggggcgtggcggccgggcggctcaaggcggagaagaagagcggcctgcgcgtccac
ggccggaccggcgagccctgcccggtctgcggcgacaccgtccgcgaggtgtccttcagc
gactcctcgctccagtactgcccgacctgtcagacgggcggcaagccgctggcggaccgc
cggatgtcgcggctgctgaagtaa
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