Streptomyces phaeoluteigriseus: NFX46_23845
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Entry
NFX46_23845 CDS
T08568
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sphw
Streptomyces phaeoluteigriseus
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphw03021
]
NFX46_23845
Transcription machinery [BR:
sphw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFX46_23845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
HTH_27
GerE
MarR
MarR_2
HTH_35
HTH_31
Motif
Other DBs
NCBI-ProteinID:
USQ86470
LinkDB
All DBs
Position
5393639..5394526
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AA seq
295 aa
AA seq
DB search
MHTAVIGSQAQVVEDTAGAGTGGVPLPGVEDPSRVAPRDARELSRQFFKRLTELEEGTHE
YQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFEISREVEFTSFA
LPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKARDELAGRLDREPTVAELATLMNLTE
REVVEAQIASNGYNSSSLDAALTGDGPEGGEAVLADFIGVEEDGLRLVEDFHSLAPLMAE
LSERDRQILHMRFVEEATQAEIGERLGCSQMHVSRLIKRIIARLREGMLGELGCA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgccgtgatcgggtcgcaggcacaggtcgtcgaggacaccgccggagccggc
acgggcggcgtaccgctgccgggagtcgaggaccccagccgcgtggccccccgcgacgcc
cgtgagctgtcgcgtcagttcttcaagcgccttacggagctggaggagggcacgcacgag
taccagtacgcgcgcaacaccctcatcgagatgaacatgtcgctggtgcggttcgccgcc
gggcggttccggggtcgcggcgacgacatggaggacatcgtccagaccgggatgatcggc
ctgatcaaggccatcgaccggttcgagatctcgcgcgaggtcgagttcacctccttcgcg
ctgccctacatcgtgggcgagatcaagcgcttcttccgggacacgacctgggcggtgcac
gtgccgcggcggctccaggagctgcgggtggaactggccaaggcgcgcgacgaactcgcc
ggccgcctggaccgggagccgaccgtcgcggagctggccacgctgatgaacctcacggag
cgtgaggtggtcgaggcgcagatcgcgtccaacggctacaactcctcctccctggacgcc
gccctcaccggtgacggcccggagggcggcgaggcggtgctggccgacttcatcggcgtg
gaggaggacgggctgcggctcgtcgaggacttccactcgctggccccgctgatggccgag
ctgagtgagcgcgaccggcagatcctccacatgcggttcgtggaggaggccacccaggcg
gagatcggtgagcggctcggctgctcccagatgcacgtctcccgcctgatcaagcggatc
atcgcgcggttgcgcgaggggatgctgggggagctgggctgcgcctga
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