Streptomyces phaeoluteigriseus: NFX46_30060
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Entry
NFX46_30060 CDS
T08568
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sphw
Streptomyces phaeoluteigriseus
Pathway
sphw00040
Pentose and glucuronate interconversions
sphw01100
Metabolic pathways
sphw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NFX46_30060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFX46_30060
Enzymes [BR:
sphw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NFX46_30060
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
USQ87596
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Position
complement(6758250..6759569)
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AA seq
439 aa
AA seq
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MNAQRWHGHATKSAVVVGCTALAMTVTGTTAQAHSPRDVARQTLPANDGWAAYGTGTTGG
AAADAEHVYTVTTWAEFRSALEASGSAPKIIKVRGTIDAVSEGCDAFAAPGYDFDAYLAA
YAPEVWGLDTDLSAEPADSPEGLRRTSAANQDKAIKVSVPANTTIIGVGRNAGIKGASLQ
IRAVDNVIIRNIAFESPIDCFPQWDPTDGSKGNWNSEYDTAVVYGSTHVWLDHNTFTDGS
HPDSAAPTYFGMLYQQHDGELDIVRGSNYVTASWNVFTEHDKTILIGNSDSESTAVGDRG
KLKVTFHHNLFSKLVERAPRVRFGQVDSYNNHFVADASYSYSFGIGKESQLVAQHNAFTL
PAGVSAAKALKKWSEAPVTADGNYVNGKPVDLIAVHNAEIPAETLQSGAGWTPTLRTRVD
PAKAVPGIVTGRAGAGKIC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcacagagatggcatgggcatgccacaaaatcggccgtcgtggtcggctgcacc
gcgctggccatgacggtcaccggcaccaccgcccaggcgcactccccccgtgacgtcgcc
cggcagaccctgccggccaacgacggctgggccgcgtacggcaccggcaccaccggcggt
gccgccgccgacgccgagcacgtgtacaccgtcaccacctgggcggagttcaggtccgcc
ctggaggccagcggcagcgcaccgaagatcatcaaggtcaggggcacgatcgacgccgtc
tccgagggatgcgacgccttcgccgcgcccggctacgacttcgacgcctacctcgccgcg
tacgcgccggaggtctggggtctcgacaccgacctgagcgccgagcccgccgacagcccc
gagggcctgcggcgcacctccgccgccaaccaggacaaggcgatcaaggtcagcgtcccc
gccaacaccaccatcatcggtgtgggcaggaacgcgggcatcaagggggccagcctccag
atcagggccgtcgacaacgtgatcatccgcaacatcgccttcgagagccccatcgactgc
ttcccgcagtgggaccccaccgacggctcgaagggcaactggaactccgagtacgacacc
gccgtcgtctacgggtccacgcacgtgtggctggaccacaacacgttcaccgacggctcc
caccccgacagcgccgcgccgacctacttcggcatgctctaccagcagcacgacggcgaa
ctcgacatcgtccgcggctcgaactacgtcaccgcctcctggaacgtcttcaccgagcac
gacaagacgatcctcatcggcaacagcgacagcgagtccaccgccgtgggcgaccggggc
aagctgaaggtcaccttccaccacaacctgttctccaagctggtcgagcgcgcgccccgg
gtccggttcggtcaggtcgactcctacaacaaccacttcgtcgccgacgcctcctactcc
tacagcttcggcatcggcaaggagtcccagctcgtcgcccagcacaacgcgttcacgctg
cccgccggcgtcagcgcggcgaaggccctgaagaagtggagcgaggcgccggtcaccgcc
gacggcaactacgtcaacggcaagcccgtcgacctgatcgccgtgcacaacgcggagatc
cccgccgagaccctccagtccggcgcgggctggacgcccaccctgcgcaccagggtcgac
cccgcgaaggccgtccccggcatcgtcaccggccgggccggcgccggaaagatctgctga
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