Streptomyces phaeoluteigriseus: NFX46_30715
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Entry
NFX46_30715 CDS
T08568
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sphw
Streptomyces phaeoluteigriseus
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphw03019
]
NFX46_30715 (hrpB)
Enzymes [BR:
sphw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NFX46_30715 (hrpB)
Messenger RNA biogenesis [BR:
sphw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NFX46_30715 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
CON_HrpB
AAA_25
AAA_30
Helicase_RecD
Rv0078B
NTPase_1
AAA_11
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
USQ87712
LinkDB
All DBs
Position
6900181..6902706
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AA seq
841 aa
AA seq
DB search
MIRYDALDALPVRAALPALHDALAGQGTAVLAAPPGTGKTTLVPLALAGLVGEGPVRRVV
VAEPRRIAARAAARRMAWLLGERTGESVGYTVRGERVVGRHTRVEVVTTGVLLQRLQRDQ
ELTGVDVVVLDECHERHLDADTAAAFLWDVRETLRPELELVAASATTDTENWSRLLGGAP
VVEAHGSSYDVEVVWVPPVRPVRPPHGMWVDQALLAHVASVVRRALEERSGDVLCFLPGV
GEIARVAGRLGDLGGVDVLQVHGRAPAAVQDAVLAPGERRRVVLATSVAESSLTVPGVRV
VVDSGLAREPRVDHARGLSALATVRASLAAGRQRAGRAGREAPGAVYRCWAEAENARLPR
FPSPEIKVADLTAFALQAACWGDPGAAGLALLDPPPGGAMAAAGRLLRAVGAVDAAGRAT
ERGVRLTRAGLHPRLGRALLDGASLIGAERAAEVVALLSEEAPREYGDDLAAALRAVRRG
GDAYAGRWRTEVRRLRAVAAEFSGPAEGAVAGPSALAREEGRVGVVAALAFPERVARADG
GSCLMVSGTRAEVRDGSALRGAPWIAVAVADRPVGKGHARVQLAAVVDEEVARFAAGTLL
DTREEVHWSEGDVVARRVERLGAVELAARPLRDADAGLVREALLEGLREEGPGLLRWSAE
ARVLRQRLAFLRARLGEPWPDVSDAALHARVDEWLEPELSRARRRGDLARIDAGKALARL
LPWASGEAARLDELAPERITVPSGSGIRIDYADPGQPVLAVKLQEMFGLQESPRVAGVPL
LVHLLSPAGRPAAVTADLASFWKDGYKGVRAELRGRYPKHPWPEDPAGAQPTRHTNARLR
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttacgacgccctggacgcgctgcccgtacgggccgccctgcccgcgctgcac
gacgccctggccgggcaggggaccgccgtgctggcggcgccgcccggcaccgggaagacg
acgctggtaccgctggcgctggccgggctggtgggcgaggggccggtgcggcgggtggtc
gtggcggagccgcggcggatcgcggcgcgggcggcggcccggcggatggcgtggctgctc
ggtgagcggaccggggagagcgtcgggtacacggtgcgcggcgagcgcgtcgtcgggcgg
cacacgcgcgtggaggtcgtcaccaccggtgtgctgctccagcgtctccagcgcgaccag
gagctgaccggggtcgacgtggtggtgctggacgagtgccacgagcggcatctggacgcg
gacacggcggcggccttcctgtgggacgtccgcgagacgctccgccccgaactggagctg
gtcgccgcgtcggcgacgaccgacacggagaactggtcccggctgctgggcggtgcgccg
gtggtcgaggcccacgggtcgtcgtacgacgtcgaggtggtgtgggtgcctccggtccgg
ccggtacggccgccgcacggcatgtgggtggatcaggcgctgctcgcgcatgtcgcgtcg
gtggtgcggcgggcgctggaggagcggtcgggggacgtgctgtgcttcctgccgggggtc
ggggagatcgcgcgggtcgcggggcggctcggggacctgggcggcgtggacgtgctccag
gtgcacggtcgggcgccggccgcggtgcaggacgcggtgctggctccgggggagcgtcgc
cgggtggtcctggcgacgtcggtcgccgagtcgtcgctgacggtgccgggcgtgcgggtc
gtcgtcgactcgggactggcgcgggagccgcgggtggaccacgcgcgcgggctgagcgcg
ctggcgacggtgcgggcgtccctcgcggcgggacggcagcgggccggccgggccgggcgt
gaggcgccgggcgcggtgtaccgctgctgggcggaggcggagaacgcccgcctgccgcgc
ttcccgtcgccggagatcaaggtggccgacctgacggcgttcgccctccaggcggcctgc
tggggcgatcccggggcggccgggctcgcgctgctggaccctccgccgggcggggcgatg
gcggcggcgggccggctgctgagggcggtcggtgcggtggatgcggcgggccgggccacg
gagcgcggggtgcggctgacgcgggccgggctgcacccgcggctgggccgggcgctgctc
gacggggcgtcgctgatcggggcggagcgggccgcggaggtggtcgcgctgctcagcgag
gaggctccgcgggagtacggcgacgacctcgcggcggccctgcgcgccgtccggcgcggc
ggtgacgcgtacgcggggcgctggcggacggaggtacggcggctgcgggccgtggcggcg
gagttctccggcccggcggagggggccgtcgcgggtccttccgcactggcgcgcgaggag
ggccgggtcggtgtcgtcgcggccctcgccttcccggagcgggtcgccagggccgacggc
ggctcctgcctcatggtgtccgggacgcgggccgaggtgcgtgacgggtcggcgctgcgc
ggcgccccgtggatcgcggtcgccgtcgccgaccggcccgtcggcaaggggcacgcgcgc
gtgcagctcgcggcggtcgtcgacgaggaggtcgcccggttcgcggccggcacgctgctc
gacacccgcgaggaggtccactggtccgagggggacgtggtggcccggcgggtcgagcgg
ctcggggccgtggagctggcggcgcggccgctgcgggacgccgacgccggactcgtacgg
gaggcgctgctcgaagggctgcgggaggaggggccggggctgctgcggtggtcggcggag
gcgcgggtgctgcggcagcgactggcgttcctgagggcgcgtctcggggagccgtggccg
gacgtctccgacgcggcgctgcacgcgcgcgtggacgagtggctggaacccgagctgagc
cgggcccggcggcgcggcgacctggcgcggatcgacgcagggaaggcgctcgcgcggctg
ctcccctgggcgtccggggaggcggcacggctggacgagctggcgccggagcggatcacg
gtgccgagcgggtccggaatccggatcgactacgccgaccccgggcagccggtgctggcg
gtgaagctccaggagatgttcgggctccaggagtcgccgcgcgtggcgggggtgccgctg
ctggtgcacctgctgtcccccgccggacggcccgccgccgtgaccgccgacctcgcctcc
ttctggaaggacggctacaagggcgtacgggcggagctgcggggccgctatcccaagcat
ccgtggccggaggaccccgccggtgcccagccgacccggcacaccaacgcgcggctcagg
cggtga
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