Streptomyces phaeoluteigriseus: NFX46_31105
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Entry
NFX46_31105 CDS
T08568
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sphw
Streptomyces phaeoluteigriseus
Pathway
sphw03030
DNA replication
sphw03430
Mismatch repair
sphw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFX46_31105 (dnaE)
03430 Mismatch repair
NFX46_31105 (dnaE)
03440 Homologous recombination
NFX46_31105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphw03032
]
NFX46_31105 (dnaE)
03400 DNA repair and recombination proteins [BR:
sphw03400
]
NFX46_31105 (dnaE)
Enzymes [BR:
sphw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFX46_31105 (dnaE)
DNA replication proteins [BR:
sphw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFX46_31105 (dnaE)
DNA repair and recombination proteins [BR:
sphw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFX46_31105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
USQ87782
LinkDB
All DBs
Position
complement(6984802..6988341)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWATNATGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLVASTGCPSGELQTRLRLGQYDEALRAAADYQD
IFGKDRYFLELMDHGIEIERRVRDGLLDIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSEAWQEGCANTLLVAEMVDTTGMFEAKN
LMPKFDIPEGYTEVSWFKEEVRRGMERRFPGGIPEDRQKQVEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYGEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGIDLEMLALPLDDATTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNGRQEITPIHKELEEPLQEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFTIFQAGAKKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIRVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVESIIKSRKAKGKYSSFPDYLDKVEAVVCNKRTT
ESLIKAGAFDSMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEQNDEPGFGL
DVEFTTDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPAVKVTPPMINRLGEILTHHRGDSEVRI
RLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgacccatatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccattccgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcgtatgtcgcccccgagtcgcggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgcgacgacgtctccggctccggcggc
tacacccacaagacgatctgggcgaccaacgcgaccggcctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccgcggatggacaaggagacc
atctcccagtggtccgaagggctcgtcgcctccaccggctgcccctccggcgagctccag
acccgcctgcgcctcggccagtacgacgaggcgctgagggccgccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgggacggcctgctggacatcggcaagaagctcggcatcccgccgctggtcacc
aacgactcgcactacacctacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctcggaccccgaccgcttccgcttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggaggcatggcaggagggctgc
gccaacaccctcctggtggccgagatggtggacacgaccggcatgttcgaggcgaagaac
ctcatgccgaagttcgacatccccgagggctacaccgaggtcagctggttcaaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcatccccgaggaccggcagaagcag
gtcgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgccggatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgtctcaccaaggcgatgccc
gccgacgtcctgggcaagggcatcgacctgaacggcatcaccgacccctcgcacccccgc
tacggcgaggcgggcgagatccgcgcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggactggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgaacccatcgtcgaccacgcccccgtctgggtgcggcacaccgac
ggcgtgaccatcacacagtgggactacccccagtgcgagtcgctgggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcatcgacctggagatgctcgccctgccgctggacgacgccacgaccttcgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcggcccgatgcgctcg
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacatcaactacgccgagcgcaagaacggccgc
caggagatcacgccgatccacaaggagctggaggagcccctccaggaggtcctcgcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcacttggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgacgag
ctggcgaagaacttcaccatcttccaggccggcgccaagaagaacggctacagcgacgag
gcgatccaggccctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcc
cactcggccgcgtacggactcgtctcgtactggacggcgtacctgaaggcgaactacccc
gccgagtacatggcggcgctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccgccgcatgggcatcagggtgctcccgccgaacgtgaacgagtcc
gagtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgccgtgcgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtcccgcaaggccaaggggaagtac
tcctccttccccgactacctcgacaaggtcgaggcggtggtctgcaacaagcgcaccacg
gaatcactgatcaaggccggcgccttcgactcgatgggccacacccgcaagggcctcacc
gcgcagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggagcagaacgacgagcccggcttcggcctc
gacgtcgagttcaccaccgacgagtgggacaagacgtacctgctcgcgcaggagcgcgag
atgctcggtctgtacgtctccgaccaccccctcttcggtctggagcacgtgctgtccgac
aaggcggacgcgggcatcgcccagctcaccgggggcgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttccccgcgacc
taccagctggtctcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctc
gacaagcgggaggacgtgccgcgcctggtcgcgatggaactccaggtgccggacctgtcc
aacgcgggcaccaacgcgcccgtgattctcaccatcccggccgtgaaggtcaccccgccg
atgatcaaccggctcggcgagatcctcacccaccaccggggcgacagcgaggtccggatc
aggctccagggcccgacgaagacgaccgtgctgcgcctggaccggcaccgggtcaagccc
gacccggccctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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