Streptomyces phaeoluteigriseus: NFX46_37775
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Entry
NFX46_37775 CDS
T08568
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sphw
Streptomyces phaeoluteigriseus
Pathway
sphw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sphw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFX46_37775
09124 Replication and repair
03420 Nucleotide excision repair
NFX46_37775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphw03021
]
NFX46_37775
03400 DNA repair and recombination proteins [BR:
sphw03400
]
NFX46_37775
Enzymes [BR:
sphw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NFX46_37775
Transcription machinery [BR:
sphw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NFX46_37775
DNA repair and recombination proteins [BR:
sphw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NFX46_37775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
YflT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
USQ88993
LinkDB
All DBs
Position
8577274..8578920
Genome browser
AA seq
548 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADACRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEILR
SKRVAPLVGTRIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQRQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKATTLILVTNTVSARQWKHEL
IKRTSLTEEEIGEYSGTRKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDAERLAYATAEAEEKYRFCATTETKRKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFESFRQGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTLDQDFAAHRQRFLAEQGYAYRIMDA
TELLAEEA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccactcatcgtccagtccgacaagaccctgctcttggaggtcgaccacgag
cgggccgacgcgtgccgccgggccatcgcgccgttcgcagaactggagcgggcgcccgag
cacatccacacctaccggctgaccccgctgggcctgtggaacgcgcgcgccgccgggcac
gacgccgagcaggtggtggacgcgctggtggagttcagccggtatccggtgccgcacgcg
ctgctggtggacatcgccgagacgatggaccgctacggccggctgacgctcagcaagcat
cccgcgcacggtctcgtgctgaccaccacggaccggccggtgctggaggagatcctgcgg
tccaagcgggtcgccccgctggtcgggacccggatcgaccccgacacggtcgccgtgcac
ccctccgagcgcgggcagatcaagcagaccctgctgaagctgggctggcccgccgaggac
ctcgcggggtacgtcgacggcgaggcgcatcccatcgagctggccgaggacggctgggcg
ctgcggccgtaccagaggcaggccgtggagaacttctggcacggcgggtccggggtcgtg
gtcctgccctgcggcgccgggaagacgctggtcggggccgggtcgatggcgcaggccaag
gcgaccacgctgatcctcgtcaccaacaccgtctccgcccggcagtggaagcacgagctg
atcaagcggacgtcgctgaccgaggaggagatcggcgagtacagcgggacgcggaaggag
atccggcccgtcaccatcgccacctaccaggtgctgacgaccaggcggaagggcgtctac
ccgcacctggagctgttcgactcccgcgactgggggctgatcgtctacgacgaggtccac
ctgctgccggcgccggtcttcaagttcacggccgacctccaggcgcggcggcggctgggt
ctcacggccacgctggtgcgcgaggacggccgcgagtcggacgtcttctccctcatcggg
cccaagcggttcgacgccccgtggaaggagatcgaggcgcagggctacatcgcgcccgcg
gactgtgtcgaggtccgcgtcaacctcacggacgccgagcgcctcgcctacgcgaccgcc
gaggccgaggagaagtaccgcttctgcgccaccaccgagaccaagcggaaggtgacggag
gcgatcgtgcgccggttcgccggacagcagatcctcgtcatcgggcagtacatcgaccag
ctcgacgagctgggggagcatctgaacgcgccggtcatcaagggcgagacgtccaacgcc
cagcgggagaagctgttcgagtcgttccggcagggcgagatcagcgtgctggtggtgtcg
aaggtcgcgaacttctcgatcgacctgccggaggcgacggtcgccatccaggtctcgggc
accttcggctcgcgccaggaggaggcccagcggctgggacgggtgctgcggccgaaggcg
gacggccaccaggcccacttctactcggtcgtcgcccgcgacacgctggaccaggacttc
gccgcccaccggcagcgcttcctcgccgaacagggctacgcctaccggatcatggacgcg
accgaactgctggcggaggaggcctga
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