Sphingopyxis sp. PAMC25046: E5675_00100
Help
Entry
E5675_00100 CDS
T06315
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5675_00100 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphx03019
]
E5675_00100 (groL)
03110 Chaperones and folding catalysts [BR:
sphx03110
]
E5675_00100 (groL)
03029 Mitochondrial biogenesis [BR:
sphx03029
]
E5675_00100 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphx04147
]
E5675_00100 (groL)
Enzymes [BR:
sphx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E5675_00100 (groL)
Messenger RNA biogenesis [BR:
sphx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E5675_00100 (groL)
Chaperones and folding catalysts [BR:
sphx03110
]
Heat shock proteins
HSP60 / Chaperonin
E5675_00100 (groL)
Mitochondrial biogenesis [BR:
sphx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E5675_00100 (groL)
Exosome [BR:
sphx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E5675_00100 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E5675_00100 (groL)
Exosomal proteins of breast cancer cells
E5675_00100 (groL)
Exosomal proteins of colorectal cancer cells
E5675_00100 (groL)
Exosomal proteins of bladder cancer cells
E5675_00100 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
QCB53004
LinkDB
All DBs
Position
complement(14272..15891)
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELADKFENMGAQMLREVASKQNDKAGDGTTTATVLAQAIVREGSKAVAAGMNPMDVKRGI
DLAVTTVVEDLKAHAKKVEANSEIAQVATISANGDEEVGRILAEAMEKVGNEGVITVEEA
KSLATELETVEGMQFDRGYLSPYFITNAEKLKVELDDPYILIHEKKLSNLQAMLPLLESV
VQSGRPLLIIAEDVEGDALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGNV
VSEELGIKLESVTINMLGRAKKVVIDKDNTTIVDGVGSKSDIDGRVAQIRQQIETTTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RSLKALEGLKAANDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESEEYSWGFN
AATGEYQDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEEKAAPMPAMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgaaatttgcgtcggacgcgcgtgatcgcatgttgcgcggcgtg
gatacgcttgcgaatgcagtgaaggtcacgctggggccgaagggccgcaacgtcgtgatc
gacaaaagcttcggtgcgccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagcttgccgacaagttcgagaatatgggcgcgcagatgctgcgcgaagtcgcatcgaag
cagaacgacaaggccggcgacggcacgaccaccgcgactgtgctcgcgcaggcgatcgtt
cgcgaaggctcgaaggcggtcgccgcgggcatgaacccgatggacgtcaagcgcggcatc
gatctcgccgtcaccaccgtcgtcgaggatctcaaggcgcatgccaagaaggtcgaggcg
aacagcgagatcgcgcaggtcgcgacgatctcggccaatggcgacgaagaggtcggccgc
atcctcgcggaagcgatggaaaaggtcggcaatgagggcgtgatcacggtcgaggaggcg
aagagcctcgcgaccgagctcgaaacggtcgagggcatgcagttcgatcgcggctacctg
agcccctatttcatcaccaatgccgagaagctgaaggtcgagctcgacgatccgtacatc
ctcatccacgagaagaagctctcgaacctgcaggcgatgctcccgctgctcgaaagcgtc
gtgcagtcggggcggccattgctcatcatcgccgaggatgtcgagggcgacgcgcttgcg
acgctcgtcgtcaatcgcctccgcggcgggctcaaggtcgcggcggtcaaggcgccgggc
ttcggcgaccgccgcaaggcgatgctcgaggatatcgcggtgctcaccggcggcaatgtc
gtcagcgaggaactcggcatcaagctcgagagcgtcacgatcaacatgctcggacgcgcc
aagaaggtcgtgatcgacaaggataatacgacgatcgtcgacggcgtcggttcgaagtcg
gatatcgacggccgggtcgcgcagatccgccagcagatcgagacgacgaccagcgattac
gaccgcgagaagctgcaggagcggcttgccaagcttgcgggcggcgtcgcggtcatccgc
gtcggcggcgcgaccgaggtcgaggtcaaggagaagaaggaccgcgtcgacgacgcgctc
cacgcgacccgcgcggcggtcgaggaaggcatcctgcccggcggcggcatcgcgctgctg
cgctcgctgaaggcgctcgaaggcctcaaggccgcaaacgacgaccagcagtcgggcatc
gacatcgtccgccgcgcactccgcgccccggcgcgccagatcgccgacaatgccggcgag
gacggcgcatggatcgtcggcaagctcctcgaaagcgaggagtatagctggggcttcaac
gccgccaccggcgagtatcaggacctcgtcaaggccggcgtgatcgatcccgcgaaggtc
gtgcgcaccgcgcttcaggatgccgcgtcggtcgcgtctctgctgatcaccacggaggcg
ctcgtcgccgagctgccgaaggaagagaaggccgcgccgatgccggcgatggatttctga
DBGET
integrated database retrieval system
