Sphingopyxis sp. PAMC25046: E5675_00145
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Entry
E5675_00145 CDS
T06315
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_00145
Enzymes [BR:
sphx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E5675_00145
DNA repair and recombination proteins [BR:
sphx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E5675_00145
Prokaryotic type
E5675_00145
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCB53012
UniProt:
A0A4P7RTP9
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All DBs
Position
complement(20592..21965)
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AA seq
457 aa
AA seq
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MPPAILWLRQDLRITDHPALLAAIAEGPVIPLYILDDESPGTRAIGGAQRWWLHHSLTAL
DASLRKRGSRLVRRRGPAAEILERVAAEAESTRVHATRCYEPWWRRCEDALDARLALRFH
DGNYLAPPESITNAQGARYRVFTPWYRALLGRMPPALPYAAPDHIPAPGVWPASDNLADW
GLTPTSPDWTTGFGDWSPGEKGAWRALRDWRPLAGDYKSRRDFPSLPATSRLSPHLHFGE
ISPRSIWHALGERDDAGAETFRSELGWREHGINLVDQMSDYGDRNGRPTFDNFGWRSGPE
ADRDFAAWTRGRTGYPAVDAGMRELWHTGWMHNRVRMVTASFLVKHLLIDWRRGERWFWD
TLLDADLGSNAMNWQYVAGTGVDAPVFSRIMSPLLQSERFAMGDYVRTYVPELAHLSDAE
ITAAHGQEAGVPAYPAPLIGHEAARARALTAWEALRS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccatattgtggctccgtcaggacctccgcatcaccgaccatccggcgctc
ctcgcggcgatcgccgaaggtccggtcattccgctctacatattggacgacgagagcccc
ggaacgcgcgcgatcggcggcgcgcagcgctggtggctccatcacagcctcaccgcgctc
gatgcgagccttcgcaaacgcggcagccggctcgtccggcgccgcggccctgccgccgaa
atactcgaacgcgtcgcggcggaagccgagagcacaagggttcacgcgacccgctgctac
gagccttggtggcggcgctgcgaagacgcgctggacgctaggcttgcgctgcggttccat
gacggcaattatctcgcgccgcccgagagtatcaccaatgcgcaaggcgcccgctaccgc
gttttcacgccttggtatcgcgcgcttctggggcgcatgccgcccgcccttccctatgcg
gcgcccgaccatattccggcgcctggcgtctggccggcgtcggacaatcttgccgattgg
gggctgaccccgaccagccccgactggaccacaggatttggcgactggagcccgggcgag
aagggcgcctggcgggcgctgcgcgactggcggccgcttgccggcgactataagtcccgt
cgcgattttccctcgctccccgcgacatcgcggctgtcgccgcatcttcatttcggcgaa
ataagcccccggtcgatctggcatgcgctcggcgagcgcgacgatgcgggtgccgaaacc
tttcggtcggagctcggctggcgcgaacatggcatcaatctcgtcgaccagatgtccgat
tatggcgatcgaaacgggcgccccaccttcgataatttcggctggcggagcggccccgaa
gccgaccgggactttgctgcctggacccggggacggaccggctacccggcggtcgacgcg
ggcatgcgcgagctctggcacacgggctggatgcacaaccgcgtgcggatggtcaccgcc
tccttcctcgtcaaacatctgctgatcgactggcgccgcggtgaacgctggttctgggac
acgctgctcgacgccgatctcgggtcgaatgcaatgaactggcaatatgtcgcgggcacc
ggcgtcgacgcgccggtcttctcgcgcatcatgtcgccgctgctccagagcgagcggttc
gcgatgggcgattatgtccgcacctatgttccggagcttgcacatctgtcggatgccgag
atcaccgccgcccatggacaggaggccggggtgcccgcctatcccgcgccgcttatcggc
catgaggcggcgcgggcgcgcgccctgactgcctgggaagcgctgcgcagctag
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