Sphingopyxis sp. PAMC25046: E5675_00985
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Entry
E5675_00985 CDS
T06315
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00230
Purine metabolism
sphx01100
Metabolic pathways
sphx01110
Biosynthesis of secondary metabolites
Module
sphx_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
E5675_00985 (purD)
Enzymes [BR:
sphx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
E5675_00985 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
RimK
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
QCB53158
UniProt:
A0A4P7RR99
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Position
complement(196871..198148)
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AA seq
425 aa
AA seq
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MNILLVGSGGREHALSWQLAQSPSCAKLYAAPGNPGIELYAECVPISVDDIDGLIAFVKA
HAIDFVVVGPEAPLVAGLADRLGDIGIPAFGPSAAAARLEGSKGFTKDLCARASIPTAAY
VRCTSAEEALAVLEGFSIPVVIKADGLAAGKGVIIAESREDAEAAIEDMFDGAFGSAGAE
VVIEEFMTGEEASFFALSDGKDVIAFGSAQDHKRVGDGDVGPNTGGMGAYSPAPVLTPEL
EAQVMDRIIRPTVATLAAEGTPYVGVLFAGLMLTAEGPKLIEYNCRFGDPECQVLMMRFK
GDFAALLHAAATGTIAGAEPPAFSHDYALTVVMAAKGYPGTPEKGGAIRRIADAEAGGVR
VFHAGTARDDRTLVAAGGRVLNVTATGKSVTEAQARAYAAVDKLDFPSGFCRRDIGWREV
AREAG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctgctggtcggatcggggggccgcgaacatgcgctcagctggcagttggca
caatcgccaagctgcgccaagctctatgccgcgccgggcaacccggggatcgagctctac
gccgaatgcgtgccgatttcggtcgacgacatcgacggcctgatcgccttcgtcaaggcg
cacgcgatcgatttcgtcgtcgtcggccccgaagcgccgctcgtcgccggcctcgccgat
cgcctcggcgacatcggcatcccggccttcggcccgtccgcggccgccgcacgcctcgaa
ggctcgaaaggcttcaccaaggatctctgcgcgcgcgcatcgatcccgaccgccgcctat
gtccgctgcaccagcgccgaggaagcgctcgcggtgctcgaaggcttttcgatccccgtc
gtgatcaaggccgacggactcgccgcgggcaagggcgtaatcatcgccgaaagccgcgaa
gacgctgaggcggcgatcgaagatatgttcgacggcgccttcggcagcgcgggcgccgag
gtcgtgatcgaggaatttatgaccggcgaggaggcgagcttcttcgcgctctcggacggc
aaggacgtcatcgccttcggcagcgcgcaggaccacaagcgcgtcggcgacggcgatgtc
ggcccgaacaccggcggcatgggcgcctacagccccgcgccagtgctcacccccgaactc
gaagcgcaggttatggaccggatcatccgcccgaccgtggcgacgctcgccgccgagggc
acgccctatgtcggcgtcctcttcgcgggcctgatgctgacggctgaaggcccgaagctg
atcgaatataattgccgcttcggcgatcccgagtgccaggtgctgatgatgcgcttcaag
ggcgatttcgccgcgctgctccacgccgctgcgaccgggacgattgccggcgccgaaccc
ccggccttttcgcacgactatgcgcttaccgtcgtgatggcggccaaaggctatccgggc
acgcccgaaaagggcggcgcgatccgccgcatcgccgatgccgaagcgggcggcgtgcgc
gttttccacgccggaacggcacgcgacgaccgcactctcgtcgccgccggtggccgcgtt
ctaaatgtcaccgcgacgggtaagagcgtgaccgaggcgcaggcgcgcgcctatgccgcg
gtcgacaagctcgatttcccgagcggtttctgccgccgcgatatcggctggagggaagtc
gcgcgcgaagccgggtga
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