Sphingopyxis sp. PAMC25046: E5675_01130
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Entry
E5675_01130 CDS
T06315
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5675_01130 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphx03019
]
E5675_01130 (recQ)
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_01130 (recQ)
Enzymes [BR:
sphx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5675_01130 (recQ)
Messenger RNA biogenesis [BR:
sphx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5675_01130 (recQ)
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5675_01130 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QCB53179
UniProt:
A0A4P7RSZ8
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All DBs
Position
242510..244285
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AA seq
591 aa
AA seq
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MSADALLPLLKSTFGFDHFRGRQGEVVDRVMAGERTLAVMPTGAGKSLTYQLPAVALTGC
VVVVSPLIALMHDQLRGARAAGIRAASLTSVDADFADTRQAYRDGELDLLYIAPERATGE
GFRSLMEARAPALFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPAVPRLALTATADKHTR
EDILVQLGIPDEGLVLAGFDRPNIRYRVTPRGSPAKQLTDFIAANPGPGIVYCPTRDGTE
RMAAKLAAATGRSVAAYHAGLDPERRAQVQHDFVASEDGIVTATVAFGMGIDKPDVRFVA
HAGLPKSIESYYQETGRAGRDGDPAEALMLWGAEDFARARMRLGELPEGRQASERARLNS
LAALVETVECRRALLLRHFGESPPERCGNCDTCLEPPRQIDATVLAQKLLSAVYRTGQSF
GAGHVEAVLTGRSDERISQRGHDKLSVFGIVAGEEARLIKPLVRTLVAREALETTEHGGL
MFGPAGRAMMKGEAPVLIAEPPVKRTQRASRADRAAANPVGDPLFDALRAMRRELAAEAG
VPPYVIFHDAVLRAMASERPATRSALADIPGVGGKKLDAWGDAFLNVIRQY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgacgcgctcctcccgctgctcaaatccaccttcggtttcgatcatttccgc
ggccgccagggcgaggtcgtcgatcgcgtgatggcgggcgagcgcacgctcgcggtgatg
ccgacgggggcgggcaagtcgctgacctaccaattgcctgcggtggcgctgaccggttgc
gtcgttgtggtctctccgctgatcgcgctgatgcacgatcagctgcgcggcgcgcgcgcg
gcggggattcgcgccgcgagcctgacgagcgtcgatgccgatttcgccgacacgcggcag
gcgtatcgcgacggcgaactcgacctcctctatatcgcgcccgagcgcgcgacaggtgaa
ggcttccggtcgctgatggaagcgcgcgcgccggcgctgttcgcgatcgacgaggcacat
tgcgtttccgaatgggggcatgatttccggcccgattaccggctgctgcggccgctgctc
gatgcatttcctgcggtgccgcgtctcgcgctgacggcgacggcggacaagcacacgcgc
gaggatatcctcgtccagctcggcattccggacgaggggctggtgctcgcgggcttcgac
cgcccgaatatccgctaccgcgtgacgccgcgcgggagtcccgcgaagcaactcaccgat
tttatcgccgccaatcccgggccggggatcgtctattgcccgacgcgcgacgggaccgaa
cgcatggcggcgaagcttgccgccgccacggggcgcagcgttgccgcctatcacgccggg
ctcgatcccgagcgccgcgcgcaggtgcagcatgatttcgtcgcgtcggaggacgggatc
gtcaccgcgacggtcgctttcggcatgggaatcgacaagcccgacgtgcgtttcgtcgcg
cacgccgggctgccgaagtcgatcgagagctattatcaggaaaccggacgcgcggggcgt
gacggcgaccccgccgaggcgctgatgctgtggggcgccgaggatttcgcgcgcgcgcgg
atgcggctcggcgaattgcccgaaggccgacaagcaagcgagcgggcgcggctcaattcg
cttgcggcgctggtcgagacggtcgagtgccgccgcgcgctactgttacgccatttcggc
gagtcgccgcccgaacgctgcggcaattgcgacacctgcctcgaaccgccgcgccagatc
gatgcgacggtgctcgcgcagaaactgctttcggcggtctatcgcaccgggcaaagcttt
ggcgccgggcatgtcgaggcggtgctgacggggcggagcgacgagcgcatttcccagcgc
ggtcacgacaagctttcggtcttcggcatcgtcgcgggcgaggaggcgcggctgatcaag
ccgctcgtccgcacgctcgtcgcgcgcgaggcgctcgagacgaccgagcatggcgggctg
atgttcggccccgccgggcgcgcgatgatgaagggcgaagcgccggtgctgatcgccgag
ccgccggtgaagcggacgcagagggcttcgcgggccgatcgggcggccgcgaacccggtc
ggcgatccgttgttcgatgcgctgcgcgcgatgcggcgcgaactggcggccgaagccggg
gtgccgccctatgtgatcttccacgacgcggtgctgcgcgcgatggcgagcgagcgcccc
gcgacgcggagcgcgctcgccgacattcccggcgtcggcggcaagaagctcgacgcgtgg
ggcgacgcgtttctgaacgtgatccgccaatattga
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