Sphingopyxis sp. PAMC25046: E5675_01845
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Entry
E5675_01845 CDS
T06315
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphx03032
]
E5675_01845
03036 Chromosome and associated proteins [BR:
sphx03036
]
E5675_01845
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_01845
DNA replication proteins [BR:
sphx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E5675_01845
Chromosome and associated proteins [BR:
sphx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E5675_01845
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E5675_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
RuvA_C
Peptidase_C23
Motif
Other DBs
NCBI-ProteinID:
QCB53308
LinkDB
All DBs
Position
405377..405652
Genome browser
AA seq
91 aa
AA seq
DB search
MNHAELSDSVATALGLSKADAKKAVDAVFAAITDAAAKGDEVSVNGFGKFKVKESAAREG
RNPSTGETIQIAASKKLTFGAAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgccgaactgtcggacagcgtcgcaaccgcacttggtctgagcaaggccgat
gcgaagaaggctgtcgatgccgttttcgctgcgatcaccgacgccgccgccaagggcgac
gaagtctcggtgaacggcttcggcaagttcaaggtcaaggaatcggccgcgcgtgaaggc
cgcaatccctcgactggcgaaaccatccagattgcggcttcgaagaagctgaccttcggc
gccgcgaaggccgtcaaggatcgtctgaacggctga
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integrated database retrieval system
