Sphingopyxis sp. PAMC25046: E5675_04325
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Entry
E5675_04325 CDS
T06315
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_04325 (radA)
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E5675_04325 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA_16
AAA_30
AAA_22
nSTAND_NTPase5
AAA_5
AAA_24
Lon_C
AAA
SLFN-g3_helicase
NTPase_1
CobU
nSTAND3
RecA_N
ATPase_2
AAA_14
Glyco_hydro2_C5
CbiA
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QCB53742
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Position
927204..928565
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AA seq
453 aa
AA seq
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MAKAKRQYVCQNCGSVSYRWQGQCVDCGEWNTLVEEAAETVFSAKHDLSRGGRTLTLETL
DADSRMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRLAKAGKSVV
YISGEEAAAQVRLRAQRLGLGKAPVALASATSVRDILATLDGRDADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRYAKDSEAAIVLVGHVTKDGTIAGPRVLEHMVDTVLAFEGE
RSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVANPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQLGAAEVYLNIAGG
YRLTDPAADLAVAAALISAFSERPVPADAIVFGELSLSGEVRQVAHDALRLREAAKLGFS
RGWGPKGMKGVGGISVTGFDRLGELVDLMLGRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaagcgtcaatatgtctgccagaattgcgggtcggtctcgtaccgctgg
caggggcagtgcgtcgattgcggcgagtggaacacgctggtcgaggaagccgccgaaacc
gtcttttcggcgaagcacgaccttagccgcggtgggcggacgttaacgctcgaaacgctc
gacgccgacagccggatgcccgagcggatgctgtgcggaatcgcggagttcgaccgcgcg
ctgggcggcgggttcgtcgcgggatcggcgacgctaatcggcggcgatccggggatcggc
aaatcgacgctgctgctccaggcggcaggaaggctcgcaaaggcaggcaagtcggtcgtc
tatatcagcggcgaggaagcggcggcgcaggtgcggctgcgcgcgcagcggctggggctc
ggcaaggcgccggtcgcgctggcgagcgcgacctcggtgcgcgacatccttgcaacgctc
gacggccgcgacgccgatttcgtcgtgatcgattcgatccagacgatgcacagcgacctg
atcgacagcgcgccgggaacggtgagccaggtgcgtgcaagcgcgcaggaactgatccgt
tacgccaaggacagcgaggccgcgatcgtgcttgtcggccatgtgaccaaggacggcacg
atcgcggggccgcgcgtgctcgaacatatggtcgacaccgtgctggcgttcgagggcgag
cgcagtcaccagtatcgcatcctgcgtgcggtgaagaaccgtttcggcggtaccgacgaa
atcggggtgttcgcgatgggcgaggaagggttgggcgaggtcgccaatccgtcgagcctg
ttcctgaccgaccgtagccgcgacgtgccgggttcggtggtctttcccgcattggagggc
acgcgcccggtgctcgtcgaagtgcaggcgctcaccgtccgcctcgcgagcggcgcgacg
ccacgccgggcggtcgtcggctgggacagcgggcggctggcgatggtgctcgcggtgctc
gaagcgcgctgcgggctccagttgggcgccgccgaagtctatctcaacatcgcgggaggc
taccggctcaccgatcccgccgcggacctcgcggtcgccgccgcgttgatctcggcgttc
agcgagcggccggtgcccgccgacgcgatcgtcttcggcgagctgtcgctgtcgggcgag
gtgcggcaggtcgcgcacgacgcgctgcgcctccgcgaggcggcaaagctcggtttctcg
cgcggttggggtccaaagggaatgaaaggtgtcggcgggatttcggtgaccggcttcgac
cggctcggcgaactcgttgacctgatgctcgggcgcgactag
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