Sphingopyxis sp. PAMC25046: E5675_04655
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Entry
E5675_04655 CDS
T06315
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_04655
Transporters [BR:
sphx02000
]
Other transporters
Pores ion channels [TC:
1
]
E5675_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
QCB53797
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All DBs
Position
1005611..1008409
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AA seq
932 aa
AA seq
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MRKILLAAVSATAVLVSMPAVAQDTAAPAAQDSAQQAESTDGDIVVTGVRQSLERAAEVK
RNATQVVDSIVATDIGKLPDPTVAAALQRVPGIQVQNDRNNELSTVRIRGLTDILTTVNG
REVVTTTGRGFDLQDVPAEALARIDAFKSQTADQIEGGVAGALDLRLNRPFSFRDPTLVL
TARQNYATTADASNPQFGALAAAKTDSSIGEIGALVNVTYSQAENIRSVTNLGERRFVSG
TPFGTADIMMPQVLRNMPDVGDIKRFQANAALQWQATPSLQFYADGLYTYFNSTTGFAGF
NPQPFTNNSQIAEVTLSNYCIDARVNAAGTNPQIVNNADGTQTLQPATVRTMCEPTSARF
NNVVINQNSSSEEVTQRNKMVAGGLIFEQDRGVLKVDVAYQTSRSVTENFNAEIGQRVPT
VFVEFNDDNGPSFTIDPSIPLSSENVSLRNSINQNFSTGKGSLFQARMDSEYELDGILTK
LRGGLRYAKREARFQEVRQTNTVQSIGFGNIGTPSEPNARLISSLPLSPDFLGVIGVAPR
LNGGQAFLGVNPAYLRSERGRNELRDLFGLPLEAPPYDPTKEFNASEETLAAYLEGGYEI
PIGALTLDGVVGTRVVKTDRTISGFERVGGSDAFSPIVAKRSDVDILPSATARLKFPGSF
QTRLTYSRSMRRPDFGSLNPAESLTVVGNVFLINNGTRGNPDLRPQKSDSIDLTAEYYFD
SGYVAVTGYYRSIKDRVVTANRQEEIGGENYLISTPRNVGSVDLKGIEVSAQYFFDFLPG
ALSGFGVQGAFTLADSKIKGDDTLAGNPLVGVSKYNYTAGLLYDKKGLSGRLIWTFRSKY
INGDNTGGVAVRPYDESRPVQDPYIPVFLSYVRPAGRLDFSIGYDVTDALRLDIGGTNIL
RNKTSTYWGDKRVVFALQGDETVYSIGARVKF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaattttgttggccgccgtgtcggcgaccgccgtgttggtttcgatgccggcg
gttgctcaggatacagcggcgccagccgcgcaggattcggcccagcaagcggaaagcacc
gatggcgatattgtcgtcaccggcgtgcgccagtcgctagaacgcgcggcggaggtgaag
cgcaacgcgacacaggtcgtcgattcgatcgtcgcgaccgacatcgggaaattgccggac
cctaccgtcgcggcagcgctgcagcgcgttcccggcattcaggtccagaacgaccgcaac
aacgaactgtcgaccgtccgcatccgcggcctcaccgacatattgactacggtgaatggg
cgcgaggtggtgaccacgacggggcgcggcttcgacttgcaggatgtgcccgccgaggcg
ctcgcccggatcgacgccttcaagtcacagaccgccgaccagatcgaaggcggggtcgcc
ggcgcgctcgacctgcggctcaatcgccccttcagcttccgcgatccgacgttggtcctg
accgcccgccagaattatgcgacgaccgccgatgcgagcaatccgcagttcggcgcgctc
gccgccgccaagaccgattcgtcgatcggcgagatcggcgcgctggtcaatgtaacctat
tcgcaggccgagaatatccgcagcgttaccaatctgggcgaacgccgcttcgtctcgggg
acgccgtttggcaccgccgatatcatgatgccccaggtgctgcgcaacatgcccgacgtc
ggcgacatcaagcgctttcaggccaatgccgcgctgcaatggcaggcgaccccgtcgctg
caattctatgctgacggcctttatacctatttcaacagcaccacgggcttcgccggtttc
aacccccagcctttcaccaacaattcgcagatcgccgaggttaccctcagcaattattgc
atcgacgcgcgcgtcaacgccgccgggaccaacccgcagatcgtcaacaatgccgacggg
acgcagacgcttcagcccgcgaccgtcagaacgatgtgcgagccgacgagcgcgcgtttc
aacaatgtcgtgatcaaccagaacagttcgtccgaagaggtcacgcagcggaacaagatg
gtcgctggcggcctgatcttcgaacaggatcgcggcgtgctcaaggtcgatgtcgcttat
cagacgtcgcgctcggtgacggagaatttcaacgccgagatcgggcagcgcgtcccgacg
gtattcgtcgaattcaacgacgacaacggtccttcgttcaccatcgacccgtcgatcccg
ctcagctccgaaaatgtttcgctgcgcaattcgatcaaccagaatttctcgacgggcaaa
ggcagcctgttccaggcgcgcatggacagcgaatatgaactcgacggcatcctgacgaag
cttcgcggcggtctgcgttatgccaagcgcgaggcacggtttcaggaagttcgccagacc
aacacggtgcagtcgatcggcttcggcaatatcggcacgccgtcggagccgaatgcgcgg
ctgatttcttcgctgccgctgtcgcccgacttcctgggcgtgatcggcgtcgcgccgcga
ctgaacggcggtcaggcgtttctcggcgtgaatcccgcctacctgcggtccgaacgcggc
cggaacgaactgcgcgatctgttcggcctccccctcgaggcgccgccctacgatccgacc
aaggagttcaacgccagcgaggaaaccctggccgcctatctggagggcggctatgaaatc
ccgatcggcgcgctcactctcgacggcgtggtcggcacgcgcgtcgtcaagaccgatcgc
actatctcgggcttcgagcgcgtcgggggcagcgatgccttcagcccgatcgtcgccaag
cgatcggacgtcgatatcctgccgtcggccaccgcgcgcctgaaattccctggctcgttc
cagacccgcctgacctattcgcggtcgatgcggcgtcccgatttcggttcgctcaaccct
gcggaatcgctcaccgtcgtcggcaacgtcttcctgatcaacaatggcacgcgcggaaac
cccgacctgcgcccgcagaaatcggacagcatcgatctgaccgccgaatattatttcgac
agcggttatgtcgcggtcaccggctattaccggtcgatcaaggaccgcgtcgtgacggca
aaccggcaggaagagatcgggggcgaaaattacctgatctccaccccgcgtaacgtcggg
tcggtcgacctcaagggtatcgaggtcagcgcgcaatatttcttcgacttcctgccggga
gcgctgtcgggtttcggcgtgcagggcgcgttcacgcttgctgattcgaagatcaagggc
gacgacacgctcgcgggcaatccgctggtgggcgtctccaaatataattacaccgctggg
ctgctctatgacaaaaagggcctgagcggacgcctgatctggaccttccggtcaaaatat
atcaacggcgacaacaccggcggtgtcgcggtgcgaccctatgatgagagtcggccggtt
caggatccctatatcccggtgttcctaagctatgttcgtcctgctggccgtctcgacttt
agcatcggttatgacgtgaccgacgcactgcggctcgacatcggcggtaccaacatcctg
cgtaacaagacatcgacatattggggcgacaagcgggtcgtgtttgcgctgcagggtgac
gaaacagtttatagcatcggcgcccgcgtgaaattctga
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