Sphingopyxis sp. PAMC25046: E5675_04900
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Entry
E5675_04900 CDS
T06315
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00220
Arginine biosynthesis
sphx00240
Pyrimidine metabolism
sphx00250
Alanine, aspartate and glutamate metabolism
sphx01100
Metabolic pathways
sphx01110
Biosynthesis of secondary metabolites
sphx01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
E5675_04900 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
E5675_04900 (carB)
00220 Arginine biosynthesis
E5675_04900 (carB)
Enzymes [BR:
sphx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
E5675_04900 (carB)
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Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
RimK
MucBP_2
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QCB53834
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All DBs
Position
1063951..1067271
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AA seq
1106 aa
AA seq
DB search
MPKRIDIQSILVIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPDL
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALAQDGTLAKYGVEMIGADA
EAIDKAEDRQKFRDAMDKIGLESARSGVAHTLDEAFAVLERTGLPSIIRPSFTLGGTGGG
IAYNREEFEHIVRGGLIASPTTEVLIEESLLGWKEYEMEVVRDRKDNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIMNDITGVTPASFEPTIDYVVTKIPR
FAFEKFKGAEATLSTAMKSVGEVMAIGRTIHESMQKALRGLETGLSGFNFVERLKGATHD
QLRNELAQRTPDRLLNTAQAIREGLPLAEINRVAGYDMWFLERIAEIVEAEQEVCKNGLP
RDAEGLRKLKAMGFSDKRLAYLALQSANLQPGTRHATAHGSGLIHEAVKAMTGGVTEGEV
RKLRHKLGVRPVFKTIDTCAAEFQAQTPYLYSTYEAPTFGEPENEANPSDRKKVVILGGG
PNRIGQGIEFDYCCCHACFALEEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLE
ILHVEMSKGELVGVIVQFGGQTPLKLAQALSEAGIPILGTSPDAIDLAEDRERFAALVNK
LGLKQPENGIARSREEAVAVAARIGYPVLTRPSYVLGGRAMEIVDDQAQLENYIETAVQV
SGDSPVLIDRYLRDAIEVDVDALCDGTDVVVAGVLQHIEEAGVHSGDSACSIPPYSLSDT
IVAEIERQADALARALEVRGLMNIQFAVKDDEVYLIEVNPRASRTVPFVAKAVGSPIAKI
AARVMAGEKLADLPTINRDIDHVAVKEAVFPFARFPGTDPVLSPEMKSTGEVMGIDSDFN
LAFAKAQLGAGDRLPTTGRLFVSVKDSDKARVIGAVKQLADWGWKVIATGGTADYLGSQG
IDVERVNKVAEGRPHIVDRIKDGDVQLIFNTTEGWQSLQDSQSIRASALAADIAYYTTAA
ASDAATQAIGALRSRSLEVKPLQDYY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaatcgacatccaatccatcctcgtcatcggcgccggcccgatcgttatc
ggtcaggcgtgcgagttcgactattcggggacgcaggccatcaaggcgctgaaggaggag
ggctatcgcatcgtcctcgtcaactccaacccggcgacgatcatgaccgatcccgacctc
gccgacgccacttatgtggagccgatcacgcccgagatcgtcgcgaagatcatcgaaaag
gagcgccccgatgcggtgctgccgacgatgggggggcagaccgcgctcaacaccgcgctc
gcgctcgcgcaggacggcacgctcgcgaaatatggcgtcgagatgatcggcgccgatgcc
gaggcgatcgacaaggcggaggaccggcagaagtttcgcgacgcgatggacaagatcggg
ctcgaaagcgcgcgcagcggcgttgcgcacacgctcgacgaggcgttcgcggtgctcgaa
cgcaccgggctgccctcgatcatccgtccgtccttcacgctcggcggtaccggcggcggg
atcgcgtataaccgcgaggagttcgaacatatcgtgcgcggcgggctgatcgcctcgccg
acgaccgaagtcctgatcgaggaatcgctcctcggctggaaagaatatgagatggaggtg
gtgcgcgaccgcaaggacaattgcatcatcatctgttcgatcgagaatgtcgatccgatg
ggcgtgcataccggcgacagcatcaccgtcgcgcccgcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgcgagcatcgcggtgctgcgcgagatcggggtcgaaaccggc
gggtcgaacgtccagttcgcggtcaatcccaaggacggccgcctgatcgtgatcgagatg
aacccgcgcgtgtcgcgctcgtcggcattggcgtcgaaggcgacgggcttcccgatcgcc
aaggtcgcggcgaagctcgcggtcggctatacgctcgacgagatcatgaacgacatcacc
ggggtgaccccggcatcgttcgaaccgacaatcgactatgtcgtcaccaagatcccgcgc
ttcgcgttcgaaaagttcaagggcgccgaggcgacgctgtcgaccgcgatgaagtcggtc
ggcgaagtgatggcgatcggccgcaccatccatgaatcaatgcagaaggcgctgcgcggg
ctggagacggggctttcgggcttcaacttcgtcgagcggctgaagggcgcgacgcacgat
cagctgcgcaacgagctggcgcagcgcactcccgaccggctgctcaacaccgcgcaggcg
atccgtgagggcctgccgctcgccgagatcaaccgcgtcgcgggttacgacatgtggttc
ctcgaacgcatcgccgagatcgtcgaagccgagcaggaggtttgcaagaacggcttgccg
cgcgatgccgaagggctgcgcaaattgaaggcgatgggcttttccgacaaacgccttgcc
tatctcgcgctccagtcggcgaacctccagccgggcacgcgtcatgcgaccgcgcacggc
agcggtttgatccacgaggcggtcaaggcgatgaccggcggcgtgaccgagggtgaagtg
cgcaagctgcgccacaagctcggcgtgcgcccggtgttcaagacgatcgacacctgcgcg
gcggagtttcaggcgcagacgccctatctctattcgacctacgaagcgccgacttttggc
gagcccgagaatgaggcgaacccgtcggaccgcaagaaggtcgtgatcctcggcggcggt
cccaaccgcatcgggcaggggatcgagttcgattattgctgctgccacgcctgcttcgca
ctcgaagaggcgggctatgaaacgatcatggtcaactgcaaccccgaaacggtgtcgacc
gactatgacacgtccgaccgcctctatttcgagccgctgaccgccgaggatgtgctcgaa
atcctccacgtcgaaatgtcgaagggcgaactcgtcggggtgatcgtccagttcggcggg
cagacgccgctcaagctcgcgcaggcgctgagcgaagcgggcatcccgatcctcggcacc
tcgcccgacgcgatcgacctcgccgaagaccgcgagcgcttcgcagcgctcgtcaacaag
ctcggtctcaagcagcccgagaatggcatcgcgcgcagccgcgaggaagccgtcgcggtc
gcggcgcgcatcggttatccggtgctcacgcgcccctcctatgtgctcggcggccgcgcg
atggagatcgtcgacgatcaggcgcagctcgaaaattacatcgagaccgcggtgcaggtg
tcgggggacagcccggtgctgatcgaccgttatctgcgcgacgcgatcgaggtcgatgtc
gatgcgctctgcgacggcaccgacgtggtcgtcgcgggcgtgctccagcatatcgaggag
gcgggcgtccactcgggcgacagcgcctgctcgatcccgccctacagcctgtcggacacg
atcgtcgccgaaatcgagcggcaagccgacgcgctcgcgcgtgcgctcgaagtccgcggc
ctgatgaacatccagttcgcggtcaaggatgacgaggtctatctgatcgaggtcaacccg
cgcgcgtcgcgcaccgtgcccttcgttgcgaaggcggtgggttcgccgatcgccaagatc
gcggcgcgcgtgatggcgggcgaaaagctcgccgacctgcccacgatcaaccgtgacatc
gaccatgtcgcggtgaaggaagcggtcttccccttcgcgcgcttccccggcaccgatccg
gtgctgagccccgagatgaaatccaccggcgaagttatgggaatcgatagtgatttcaac
cttgcgttcgccaaggcgcagctcggcgcgggcgaccgcctgccgaccacggggcgcctc
ttcgtgtcggtcaaggacagcgacaaggcgcgcgtcatcggcgcggtgaagcagctcgcc
gactggggatggaaggtcatcgcgaccggcggcaccgcagactatctggggagccaaggg
atcgacgtcgagcgcgtcaacaaggtcgccgaagggcgtccgcatatcgtcgaccggatc
aaggatggcgacgtccagctgatcttcaacacgaccgaaggctggcagtcgctgcaggat
tcgcaatcgatccgcgcctcggcgctggcggccgatatcgcctattatacgacggcggcg
gcgagcgatgcggcgacgcaggcgatcggggcgctccgctcgcgctctcttgaagtaaag
ccgcttcaggactattattga
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