Sphingopyxis sp. PAMC25046: E5675_05890
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Entry
E5675_05890 CDS
T06315
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_05890
Transporters [BR:
sphx02000
]
Other transporters
Pores ion channels [TC:
1
]
E5675_05890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QCB54008
LinkDB
All DBs
Position
complement(1257628..1260564)
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AA seq
978 aa
AA seq
DB search
MNKKAYWLASAVVMALPQVSNAQEVIAEEPDGGDNVIVVTAQRQAQSLQDVPIAVSAFSA
EALESQQIENASDLQLTLPNVSFSKGNFTSASFTIRGVGDLCVGVTCDAATAIHVNGSPL
FGTRLFETEYFDLERIEVLRGPQGTLFGRNATSGVVNVVTAKPKLSRFEAEAQFEYGNFN
SIEARGMVNVPIGDMIGVRLAGIYVNRDGYTTNLYDGSDIDARDLYALRGSLRFEPGPDT
TIDLMGYYFREKDTRLRNQKQTCQRDPLGVLGCLNNRRDFDTTNANSTVGATLSSSEFFA
IQGIPAVLGLGSLYGPDGFSGFQEPGDVRVVNTAYTPFYFAEELQVQARLEQKFGAMTLT
ATGIYQDTEVDSRQDYFLGIQSRAGFAPALNTLDFFAANGLPTGLAPPAPAFIPGSSAYF
SPIAGALIPDGPQGVLCTSDNDDGSRGAFEGNSLCSETPLSFDRSSEQRESWSGELILTS
DFDGPFNFLLGGIYAKSKTTDNSYYVNSFALDYASAVLGSFGSLSGGLPPSYFATSMYRN
NSLESNLESYGIFGEVYFDLSDRLTLTGGLRYNNDKKDVTARTTLISFLNPYANDGDPFD
TPITPLTGPSGLFDADPGTPGQQLAQFREVSFDEITGRAVLAFEVTPDNSLYASYSRGYK
SGGINPPLSPIFAVSESFGSETIDAFEIGSKNVFANGALQLNATAFYYKYSGLQLSRIVA
RTSVNDTVDANIWGVELESVIRPDPNWLINLSFSYLNAKVAGDQFFSNPRDPGGGDPDAV
IIKDISNGAHCAVTGPAPGVADAFVAGVNAALGLRAPQEFPSDGNIASSGAFGICGVLAS
AIPANSGIQVLSPGVEVNIKGNTLPQAPNVKVSMGVQYTAEVGNGMTLVPRVDISMTGKQ
YGNIFNGRINRIQPFVQANAVLQLNGADERWFVRGFVQNIFDSNSVTGLYVTDASSGNFT
NIYTLDPRRYGVAIGAKF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaagcctattggttggcaagcgccgtcgtgatggcgttgccacaggtctca
aatgctcaggaagtcatagccgaagagccagatggcggtgacaatgtcatcgtcgtgaca
gcgcaacgtcaggcgcaaagcttgcaagacgtaccgatcgctgtcagcgcattcagcgct
gaggcgcttgaaagccagcagatcgaaaatgcctcggatctacagctgacgctgcccaat
gtatctttctcgaaaggcaatttcacctcagcttcattcactattcgcggcgttggcgac
ctgtgcgtcggcgtcacctgcgatgctgcgaccgcaatccatgtcaatggatcccccttg
ttcggaacacgcctgttcgagaccgaatatttcgatctggaaaggattgaagtccttcgc
ggacctcaaggcaccctgttcggccggaatgcgacctccggggtcgtgaatgttgtgacc
gcgaaacccaaactctcccgtttcgaggctgaagcgcaattcgagtatggcaatttcaac
agcatcgaagcgcgtggcatggtcaacgtcccgatcggggatatgatcggcgtgaggctg
gcgggcatatatgtgaaccgcgacggttatacgacgaatctctatgatggatcggacatc
gacgctcgggacctctatgcgttgcgaggctcccttcgtttcgaacccggtcctgatacg
acgatcgatctcatgggctattatttccgggaaaaggacacgcgcctcagaaaccagaaa
caaacgtgccaacgcgatccattgggcgtgctcggatgcctgaacaatcgacgtgatttc
gataccacgaacgcaaattcaacggtcggtgcgacgctcagttcatccgagttcttcgcc
attcagggcattcccgccgtgctcggcctcggcagcctttatggccctgatgggttttcc
gggtttcaggagcctggcgatgtgcgtgtcgtcaacacggcctatacccctttctatttt
gccgaagagctacaggtgcaggcgcgccttgagcaaaaattcggcgcgatgaccctgacg
gccaccggcatttatcaggatactgaagtcgattccaggcaggactattttcttggaatt
caaagccgtgccggtttcgccccggcgctcaatacgttggacttttttgcggctaacgga
ttaccgacaggtcttgctccgccggcgccagccttcattcccggctcttcggcctatttt
tcgccgattgccggcgctctaatcccggacggtccgcagggcgtgctgtgcacgtcggat
aatgatgatggaagcagaggcgctttcgaagggaactcgctgtgttccgaaacgccgctt
tctttcgatcgatcttcggaacaacgcgaatcgtggagcggagagctcatcctcacgagt
gacttcgacgggccgttcaatttcctgttgggcggaatttacgcgaaatcgaaaaccacc
gacaatagctattatgtgaactcgtttgcgctcgattacgccagtgccgtattgggttca
ttcggctccttgtcgggcggccttccgccatcctatttcgcgacgtcgatgtatcggaac
aactcgctggaatcgaatctagagagctatggcattttcggcgaggtctatttcgatcta
agcgaccggctgacgttgaccggggggctgcgttacaataatgacaagaaggatgtgacg
gcgcgtacgacgctgatcagtttcctgaacccttatgccaatgatggagatccgttcgat
accccgataacgcccctcaccgggccgtctgggcttttcgatgccgacccggggacgccg
ggccaacagctcgcccagtttcgcgaagtaagcttcgacgaaattaccggacgagcagtt
ctggccttcgaggttacgccggacaattcactctatgcatcttattctaggggttacaaa
tccggcgggatcaatcctccgctttctccgattttcgccgtcagcgagagtttcggctct
gaaacgatcgatgccttcgagatcggctccaagaacgtcttcgcaaacggcgcgttacaa
ctcaatgccaccgcattttactacaaatatagtggactgcagctcagccgcatcgtggca
agaacgtccgtgaatgacacggttgacgccaatatctggggtgtcgaactggagtctgtc
atcaggccggacccgaactggcttatcaatctgtccttcagctatctcaatgccaaggtc
gccggcgatcaattcttctccaatccgcgtgatccgggcggcggggatcctgatgccgtg
attatcaaggacatcagcaatggtgcgcactgcgctgtcacgggacctgcgcctggcgtt
gctgatgcgttcgttgcgggcgtaaatgcggctctcggccttcgcgcaccgcaggaattt
ccttcggacggcaatatcgcctccagcggcgcgttcggcatttgcggtgtcctcgcgagc
gctatccctgcgaacagcgggatccaggtattgagtcctggcgtcgaggttaacatcaag
ggcaacacattgccgcaagcgccgaatgtcaaggtctcgatgggcgtgcagtacacggca
gaggtcgggaatggtatgacactcgtcccccgcgtcgacatttccatgaccggaaagcaa
tatggcaatatcttcaacggcagaattaatcgcatccaacctttcgtacaggctaatgca
gttttgcagttgaatggtgccgacgagcgctggtttgtccgggggttcgttcagaatatc
ttcgatagcaactcagttaccggactttatgtcaccgatgcatcttccggtaattttaca
aatatctacacgcttgatccgcggcgttatggtgtcgcgatcggcgcaaaattctaa
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