Sphingopyxis sp. PAMC25046: E5675_07905
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Entry
E5675_07905 CDS
T06315
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_07905
Transporters [BR:
sphx02000
]
Other transporters
Pores ion channels [TC:
1
]
E5675_07905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QCB56888
LinkDB
All DBs
Position
1695769..1698348
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AA seq
859 aa
AA seq
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MLCAATTPAYAFVQDAAPAEDAAPDTTDYGNEIIVTATKRSQTLQDTPVAVSVTSGADLE
NAQIRDLIDLQSAVPSLRVSQLQSSANTNFIIRGFGNGANNAGIEPSVGVFIDGVYRSRS
AAQIGDLPNVERVEVLRGPQSTLFGKNASAGVISIVTRKPQYEFGGSIEATYGNYDAITV
KGDITGPISETVAFSIGGNYNRRDGYAQDLALDTDVNDRNRWGVRGQLLFEPTDALSIRL
IGDYDKIDENCCIAGNVIAGPTVAITDALAGGTSVDRENPFSYDVYNNFLSSNEIENYGG
SAQIDYDLGTMALTSITAYRQVRALTNQDSDFTAADLIGENSQDLGIDTFTQEVRLTSDF
DGPVNFLLGGYYFNEKIDQKNGLLFGDDFRPYGNALIQAASGGALNVGTLEGTLGTLEGD
PTKYLGTFFRAGDGFDEAYRMKNEAFSIFGTVDFDVTDRLTLTAGANYTKDKKRFSTDVV
STDTFSAIDLDAAGFAPFRNQLLLGGALQQAGVNPNDPAAVAAFATNPATAPIFQQFVAF
ADANDNNPAANPLNGLKAFQFLPPFLNVPNAVESGKTNDSDLAWSVRAAYELTDTVNVYA
TYATGFKASSVNLSRDSRPLASDLAAIAAAGLTTPNLAAGSRFAAPEESEVYEFGLKANW
SVAAMNLAVFKQSIKGFQSNVFTGTGFALANAGKQSTFGVEFDGSVRPVDGLNLNLAVTY
LDAKYDSFVGSAFGDLSGRKPAGIPDLAVSMGATYTHEFAGGTRAIAHVDYQYESPTQIV
DGLNGFPESVAQNLKREVNQLNASFTLALTNGLEVGVWGRNLTNAQYLTTIFNAVAQAGS
VSGYPSQPRTYGGTVRFKF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgctgccacgaccccggcctatgcctttgtccaggatgccgcgccggccgag
gatgcggcccccgacaccaccgactatggcaacgagatcatcgtcaccgcgacgaagcgg
tcgcagacgttgcaggacacgccggtcgccgtttcggtcacctcgggcgccgacctggaa
aatgcgcagatccgcgatctgatcgacctgcagtcggcggttcccagccttcgcgtgtcg
cagcttcagtcgagcgcgaacaccaacttcatcattcgcggcttcggcaacggcgcgaac
aacgctggcatcgaaccgtcggtcggcgtcttcatcgacggcgtctatcgctcgcgttcc
gccgcgcagatcggcgaccttcccaatgtcgagcgcgtcgaggtgctccgcggcccgcaa
tcgacgctgttcggcaagaatgcgtcggcgggcgtcatcagcatcgtcacgcgcaagccg
caatatgaattcggcggctcgatcgaggcgacctatggcaattacgacgcgatcaccgtc
aagggcgatattaccggcccgatcagcgaaacggtcgccttctcgatcggcggcaattac
aatcgtcgcgacggctatgcgcaggacctcgcgctcgataccgacgtcaacgaccgcaac
cgctggggcgtgcgcggccagcttttgttcgaaccgaccgacgcactcagcatccgcctg
atcggcgattacgacaagatcgacgaaaattgctgcatcgcgggcaatgttatcgccggg
ccgacggttgcgatcaccgacgcgctcgcgggcggcacgagcgtcgatcgcgaaaatccc
ttctcctacgacgtctacaacaatttcctgtcgtcgaacgagatcgagaattacggcggt
tcggcgcagatcgactatgacctcggcacgatggcgctgacctcgatcaccgcctatcgc
caggtgcgtgcgctgaccaatcaggattcggacttcaccgccgccgacctgatcggcgag
aacagccaggatctgggcatcgacacctttacccaggaagtccgcctgacctccgacttc
gacgggccggtcaacttcctgctcggcggctattatttcaacgaaaagatcgaccagaag
aacggcctgctgttcggcgacgacttccgtccctatggcaacgcgctgatccaggccgcc
agcggcggtgcgctgaacgtcggtacgctcgaaggaacgctgggcacgctcgaaggcgac
ccgacgaaatatctcggcaccttcttccgcgcgggcgacggcttcgatgaagcctatcgc
atgaagaacgaggccttctcgatctttggcacggtcgatttcgacgtcaccgaccggctg
acgctgactgccggcgccaactatacgaaggacaagaagcgtttttcgaccgacgtggtc
agcaccgacaccttctcggcgatcgacctcgacgccgcgggttttgcgccgttccgcaac
cagctgctgctcggcggcgcgctgcaacaggccggggtcaatcccaacgaccccgccgcg
gtcgcggcctttgcgacgaaccccgcgacggcgccgatcttccagcagtttgtcgcgttt
gccgatgccaacgacaacaatccggcggcgaacccgctcaacgggctgaaggcgttccag
ttcctgccgccgttcctgaacgtgccgaacgcggtcgaatcgggcaagaccaacgacagc
gatctcgcgtggagcgtccgcgccgcctatgagctcaccgacacggtcaatgtctatgcg
acctatgcgacgggcttcaaggcgagctcggtcaacctgtcgcgcgacagccgtccgctc
gccagcgaccttgcggcgatcgccgcggcggggctgacgacgccgaacctcgccgcgggc
tcgcgctttgccgcgcccgaggaatccgaagtctatgaattcggtctcaaggcgaactgg
tcggtcgcggccatgaacctcgcggtgttcaagcagtcgatcaagggcttccagtcgaac
gtcttcaccggcaccggctttgcgctggccaacgccggcaagcagtcgaccttcggcgtc
gaattcgacgggtcggtgcgtccggtcgacgggctcaacctgaaccttgcggtcacctat
ctcgatgccaaatacgacagcttcgtcggttcggcgttcggcgatctttcggggcgcaag
cccgcgggcatccccgatctggcggtgtcgatgggcgctacctatacccacgagttcgcc
ggcggcacgcgcgcgatcgcgcatgtcgactatcagtatgaaagcccgacccagatcgtc
gacggtctgaacggcttccccgaaagcgtcgcgcagaatctgaagcgcgaggtgaaccag
ctcaacgcatcgttcacgctggcgctgaccaacgggctggaggtcggcgtgtggggccgc
aacctcaccaatgcgcaatatctgacgaccatcttcaacgccgtcgcgcaggcaggcagc
gtctcgggctacccgagccagccgcgcacctatggcggcacggtccgcttcaaattctga
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