Sphingopyxis sp. PAMC25046: E5675_08230
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Entry
E5675_08230 CDS
T06315
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00970
Aminoacyl-tRNA biosynthesis
sphx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E5675_08230 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sphx03029
]
E5675_08230 (gatB)
Enzymes [BR:
sphx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
E5675_08230 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
E5675_08230 (gatB)
Mitochondrial biogenesis [BR:
sphx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
E5675_08230 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7224
Motif
Other DBs
NCBI-ProteinID:
QCB54426
LinkDB
All DBs
Position
1773411..1774877
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AA seq
488 aa
AA seq
DB search
MSDYRIKGETGEWEVVIGLEVHAQVTSNAKLFSGAATAFGAEPNTQVSLVDAAMPGMLPV
PNRECIRQAVRTGMAIEAEINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGSLTIEED
EKAGIPEPKRIGIERIHVEQDAGKLMHDQHPTMSYVDLNRSGVALMEIVSRPDMRSPAEA
GAYVRKLRSILRYVGSCDGNMEEGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMAVI
EGEAKRQVELIESGGTVVQETRLYDPDRNETRSMRSKEDAHDYRYFPDPDLLPLILDDAF
LAECRDSLPELPDAKRARYLAAGISAYNADVLTAEVESALWFDTLLETGAKPAAAANWVS
SELFGALNRLGMSFDDCPVTPAQAGELLGLVADGTISGTIAKQVFEKMLESGDGAAAIVE
REGLKQTSDTGAIETEIAKVLAANEDKVAQYKGGKEALFGFFVGQTMKAMQGKANPQVVN
ELLKKALG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactatcgcatcaagggcgaaaccggcgagtgggaggtcgtgatcggcctcgag
gtccatgcgcaggtcacctccaacgccaagctgttctcgggcgccgcgacggcgttcggg
gccgaaccgaacacgcaggtgagcctcgtcgacgcggcgatgcccggcatgctgccggtg
ccgaaccgcgagtgcatccgccaggcggtgcgcacggggatggcgatcgaggccgagatc
aacaaatggtcgcggttcgaccgcaagaattatttctacgccgacctgccgcagggctac
cagatttcgcagctttatcatccgcttgtcggcgaaggttcgctgacgatcgaggaagat
gaaaaggcggggattcccgagcccaagcgcatcgggatcgagcgtatccatgtcgagcag
gacgcgggcaagctgatgcatgaccagcatccgacgatgagttacgtcgacctcaaccgt
tcgggggtcgcgctgatggagatcgtttcgcgccccgacatgcgctcgcccgccgaggcc
ggcgcctatgtccgcaagctgcgttcgatcctgcgctacgtcggatcgtgcgacggcaat
atggaagaaggctcgatgcgcgccgacgtcaacgttagcgtgcgcaagcccggcgacgag
ttcggaacgcgcaccgagacgaagaacgtcaattcggtgcgcttcgtgatggcggtgatc
gagggcgaggcaaagcggcaggtcgagctgatcgaaagcggcggcacggtggtgcaggaa
acgcggctctacgaccctgatcgcaacgagacgcggtcgatgcggtcgaaggaagatgcg
catgattaccgctacttccccgatcccgacctgttgccgctcatactcgacgatgcgttt
ctggccgagtgccgcgacagcctgcccgaactgcccgacgccaagcgcgcgcgctatctg
gcggccgggatttcggcgtataacgccgacgtgctgaccgccgaggtcgagagcgcgctg
tggttcgatacgctgctggaaaccggcgcgaagccggctgcggcggcgaactgggtatcg
agcgagctgttcggcgcgctcaaccgcctcggcatgagcttcgacgactgcccggtcacc
ccggcgcaggcgggcgaattgctcggcctcgtcgccgacggcacgatttcgggcaccatt
gcgaaacaggtgttcgaaaagatgctcgagagcggcgacggcgctgcggcgatcgtcgag
cgcgaggggctgaagcagacgagcgacaccggcgcgatcgaaaccgaaatcgccaaggtc
ctcgccgccaatgaagacaaggttgcgcagtataagggcggcaaggaagccctgttcggc
ttcttcgtcgggcagacgatgaaggcaatgcagggcaaggcgaacccgcaggtcgtcaac
gaactgctgaagaaggcgctcggctga
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