Sphingopyxis sp. PAMC25046: E5675_08540
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Entry
E5675_08540 CDS
T06315
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphx03032
]
E5675_08540
03036 Chromosome and associated proteins [BR:
sphx03036
]
E5675_08540
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_08540
DNA replication proteins [BR:
sphx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E5675_08540
Chromosome and associated proteins [BR:
sphx03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E5675_08540
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E5675_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QCB54476
LinkDB
All DBs
Position
complement(1831795..1832073)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRLEEVERIVDTFFDSIVDQLAAGGRVELRGFGAFSTRARESRT
GRNPRTGAAVDVKAKNVPYFKPGKEMRERLNS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcagaactggttcaaaagatcgcgagcgaaaacagcgatttgcgactcgag
gaagtcgagcgcatcgtcgacactttcttcgactcgatcgtcgaccaactcgcggcgggc
ggccgcgtagaactccgcggcttcggcgccttctcgacccgcgcgcgcgaatcgcgtacc
ggtcgcaatccccgcaccggagccgccgtcgatgtgaaggcgaagaatgtgccctatttc
aaaccgggcaaggaaatgcgcgagcgcttgaacagctga
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