Sphingopyxis sp. PAMC25046: E5675_09990
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Entry
E5675_09990 CDS
T06315
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5675_09990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphx03021
]
E5675_09990
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_09990
Enzymes [BR:
sphx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5675_09990
Transcription machinery [BR:
sphx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E5675_09990
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E5675_09990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF8013
Motif
Other DBs
NCBI-ProteinID:
QCB54731
LinkDB
All DBs
Position
2131418..2131762
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKISNRFDLVLLSAHRAREISGGSELTVDRDRDKNPVVALREIAEQTIRP
KDLQETLVGSMQKVVVDDDDTPDEISSISRSAEALRLTAAAPPRSPAGGGGDFE
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgtcgaagattgcgtcgacaagatttccaaccgcttcgacctggtt
ctgctctccgcgcatcgcgcacgggaaatctcgggtggttcggaactgaccgtcgaccgc
gaccgcgacaagaatcccgtcgtcgcgctgcgcgagatcgccgaacagacgattcgtccc
aaggatctgcaggaaacgctggtcggttcgatgcagaaggttgtcgttgacgatgacgac
acgcccgatgaaatcagctcgatcagccgctcggccgaagcgctgcgcctgaccgcggcg
gcgccgccgcgcagccccgcaggcggtggcggcgacttcgaataa
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