Sphingopyxis sp. PAMC25046: E5675_10400
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Entry
E5675_10400 CDS
T06315
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5675_10400 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_10400 (uvrC)
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5675_10400 (uvrC)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
UVR
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QCB54802
UniProt:
A0A4P7RY44
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Position
2217848..2219779
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AA seq
643 aa
AA seq
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MARPNAPDRFNEEKATYVIRGDAEGDQPDLERGAEAIRSVVRKLPTRPGVYRMLDARGDV
LYVGKARALKNRVTNYTQVARLPQRLQRMVSQTRAMEIVTTTSEAEALLLEAQLIKRYRP
PYNVLLRDDKSFPFILLRTDHDFPRVQKHRGARRAKGRYYGPFASAGSVGQTLNALQKTF
LLRSCTDSFFANRSRPCLLYQIKRCSAPCVDRISKEDYAGLVSDAQDFLEGRSTAVQKRL
GAAMTQAAEAMDYEQAAVIRDRLKSLTFIQGSQSVHADGLGDADVFALTAKGGQLCVAGF
FIRGGQNWGHRSFFPAHVSGVPEAEVMASFLMQFYEGVPPPKTILVDREPDECALLAEAL
GESANRRIEISVPQRGNRRRLLEQAVRNAGEELDRRLAESSSQAKLGRELAELFDLDNPP
RRIEIYDNSHIQGTNALGAMVVAGPEGWIKGAYRKFNIKRAETQPGDDFAMMREVFQRRF
ARAIEEDPERTKGEWPDLVLIDGGKGQVSAAGAVLAELGIDDLTYVGVAKGPDRNAGRET
FYHPDGREFTLPPNNAVLFYIQRLRDEAHRFAIGAHRQKRAKAMGSSPLDEVPGIGPARK
KALLMHFGTARAVRGASLEDLRKAPGVSAAVAQAVHDFYHSGR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgaatgctcccgaccgattcaacgaagaaaaagcgacctatgtgatccgc
ggcgacgcggagggtgaccagcccgacctcgaacgaggcgccgaggcgatccgcagcgtc
gtgcgcaagctgccgacgcgccccggcgtctatcgcatgctcgatgcgcgcggcgacgtg
ctctatgtcggcaaggcgcgcgcgctcaagaaccgcgtgacgaactatacgcaggtcgcg
cgcctgccgcagcggctccagcgcatggtgtcgcagacgcgcgcgatggagatcgtcacg
acgacgagcgaggccgaggcgctgctgctcgaggcgcaactgatcaaacgctatcgcccg
ccgtacaatgtgctgctgcgcgacgacaaaagcttccccttcatcctgctgcgcaccgat
catgatttcccgcgcgtgcagaagcatcgcggcgcgcggcgcgccaaggggcgttattat
ggcccgttcgcgagcgccgggtcggtgggtcagacgctcaatgcgctgcagaaaaccttt
ctgctccgcagttgcaccgacagcttcttcgccaaccgctcgcggccgtgtctgctctac
cagatcaagcggtgcagcgccccgtgcgtcgatcgcatctcgaaggaggattatgccggg
ctggtcagcgacgcgcaggatttcctcgaaggccgctcgaccgcggtgcagaaaaggctg
ggcgcggcgatgacgcaggcggccgaggcgatggattatgagcaggcggcggtgatccgc
gaccggctcaaatcgctgaccttcatccagggcagccagtcggtccacgccgacgggcta
ggcgacgccgacgtcttcgcgctcaccgcgaagggcgggcagctgtgcgtcgcaggcttc
ttcatccgcggggggcagaattggggccatcgcagcttctttcccgcgcatgtgtcgggc
gtgcccgaggccgaggtgatggcgagcttcctgatgcaattctacgaaggcgtgccgccg
ccgaagacgatcctcgtcgaccgcgagcccgacgaatgcgcgctgctcgccgaagcgcta
ggggaaagcgcgaaccggaggatcgaaatcagcgtgccgcagcggggcaatcgccgccgc
ctgctcgaacaggcggtgcgcaacgcgggcgaggaactcgaccgccggctcgccgagagc
agcagccaagcgaagctcggccgcgaactcgccgagctgttcgacctcgacaatccgcca
cggcgaatcgagatttacgataacagccatatccaggggaccaatgcgctcggcgcgatg
gtcgtcgcggggcccgagggctggatcaagggcgcctatcgcaagttcaacatcaagcgc
gcagagacacaaccgggcgacgatttcgcgatgatgcgcgaggtgtttcagcgtcgcttc
gcccgcgcgatcgaggaggatccagagcgaacgaagggcgaatggcccgacctcgtgttg
atcgacgggggcaaggggcaggtatcggcggcgggcgcggtgctcgccgaactcggcatc
gacgatctgacctatgtgggggtcgcgaagggccccgaccgcaacgccgggcgcgagacc
ttctaccatcccgacgggcgcgaattcacgctgccgccgaacaatgcggtgctgttttac
atccagcggctgcgcgacgaggcgcaccgcttcgcgatcggtgcgcaccggcagaagcgc
gcgaaggcgatgggcagctcgccgctcgacgaggtgccgggcatcggccccgcgcgcaag
aaggcgctgctgatgcacttcggcaccgcgcgcgcggtgcgcggcgcgagcctggaggat
ttgcgcaaggcgccgggcgtcagcgcggcggtcgcgcaggcggtgcatgatttctatcat
tcgggacgatga
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