KEGG   Sphingopyxis sp. PAMC25046: E5675_11035
Entry
E5675_11035       CDS       T06315                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sphx  Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:sphx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    E5675_11035 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphx03019]
    E5675_11035 (rnc)
   03009 Ribosome biogenesis [BR:sphx03009]
    E5675_11035 (rnc)
   03036 Chromosome and associated proteins [BR:sphx03036]
    E5675_11035 (rnc)
Enzymes [BR:sphx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     E5675_11035 (rnc)
Messenger RNA biogenesis [BR:sphx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     E5675_11035 (rnc)
Ribosome biogenesis [BR:sphx03009]
 Eukaryotic type
  90S particles
   RNase
    E5675_11035 (rnc)
 Prokaryotic type
  rRNA processing factors
   E5675_11035 (rnc)
Chromosome and associated proteins [BR:sphx03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     E5675_11035 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: QCB54916
LinkDB
Position
2363031..2363711
AA seq 226 aa
MSDTLDTGALADIIGCTPDDIALYDLALTHGSTGRADYQRLEFLGDRVLGLVIASELYTR
FPAASEGEMSSRLHVLASGATCAAIAQKLDLTALIRFGAQARNDGGRYSDNIAADAIEAL
IGALYLDKGAEAARQFILTHWNEMIDGQQAAPKHPKAALQEWALARKRRPPEYEIVSREG
PDHAPRFRVAVSVGKLARAEAEGASKQAAEKAAAAALLAELEGQEK
NT seq 681 nt   +upstreamnt  +downstreamnt
ttgagcgatacgctggacaccggggcgctcgccgacatcatcggctgcaccccggatgat
atcgcactctacgacctcgcgctgacgcacggcagcaccgggcgcgccgattatcagcgg
ctcgaattcctcggtgaccgcgtgcttgggctcgtcatcgcgtcggagctttacacgcgc
tttcccgccgcgagcgagggcgagatgtcgtcgcggctgcatgtgctcgcatcgggggcg
acctgcgccgcgatcgcgcaaaagctcgacctcaccgcgctgatccgtttcggcgcgcag
gcgcgcaacgacggcggccgctacagcgacaatatcgccgccgacgcgatcgaggcactg
atcggcgcgctctatctcgacaagggagcggaggcggcccggcaattcatcctgacccat
tggaacgagatgatcgacgggcagcaggccgcgccgaagcaccccaaggcggcgctccag
gaatgggcactcgcgcgcaagcgccgcccgcccgaatatgaaatcgtctcgcgcgaaggc
cccgaccatgcgccgcgcttccgcgtcgcggtgagcgtcggcaagctcgcccgcgccgag
gccgagggcgccagtaaacaggcggcagaaaaggccgcggcggcggcgctgctcgccgaa
ctcgaaggacaggaaaaatga

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